RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 FAM84BQ96KN1 310 aaPredicted RBP6.98□□□□□ -1.29
TRA2B-211ENST00000477939 VEZTQ9HBM0 779 aa6.98□□□□□ -1.29
TRA2B-211ENST00000477939 TESPA1A2RU30 521 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 IGF2BP3O00425 579 aaKnown RBP eCLIP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 MYO1BO43795 1136 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 SLC34A2O95436 690 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 ZBTB48P10074 688 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 HIBADHP31937 336 aaKnown RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 COPB2P35606 906 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 GJA5P36382 358 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 RBM5P52756 815 aaKnown RBP eCLIP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 RASA3Q14644 834 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 LRRC24Q50LG9 513 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 CCDC91Q7Z6B0 441 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 MRPL50Q8N5N7 158 aaKnown RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 TACO1Q9BSH4 297 aaKnown RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 SERPINA10Q9UK55 444 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 TTF2Q9UNY4 1162 aaKnown RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 IQSEC3Q9UPP2 1182 aaPredicted RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 RBBP6Q7Z6E9 1792 aaKnown RBP6.97□□□□□ -1.29
TRA2B-211ENST00000477939 PTPRCP08575 1304 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 MROH5Q6ZUA9 1318 aa6.97□□□□□ -1.29
TRA2B-211ENST00000477939 KIAA0100Q14667 2235 aaKnown RBP6.96□□□□□ -1.29
TRA2B-211ENST00000477939 MANSC4A6NHS7 340 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 PPP1R12BO60237 982 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 SMARCA5O60264 1052 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 FKTNO75072 461 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 USP2O75604 605 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 CRKP46108 304 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 MRE11P49959 708 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 HMGN5P82970 282 aaKnown RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 FOXD4Q12950 439 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 PKN2Q16513 984 aaKnown RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 SUPT20HL1Q3ZLR7 823 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 CT47A1Q5JQC4 288 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 FBXO33Q7Z6M2 555 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 IFNL1Q8IU54 200 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 DZIP1LQ8IYY4 767 aaKnown RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 KLHDC4Q8TBB5 520 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 SSH1Q8WYL5 1049 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 SLC10A4Q96EP9 437 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 TEPSINQ96N21 525 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 RANBP17Q9H2T7 1088 aaKnown RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 KDM4CQ9H3R0 1056 aa6.96□□□□□ -1.3
TRA2B-211ENST00000477939 TDRD3Q9H7E2 651 aaKnown RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 CWC15Q9P013 229 aaKnown RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 ZNF70Q9UC06 446 aaPredicted RBP6.96□□□□□ -1.3
TRA2B-211ENST00000477939 ZSWIM8A7E2V4 1837 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 UNCXA6NJT0 531 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 TCP10L2B9ZVM9 353 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 H0YHG0 523 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 EPB41L2O43491 1005 aaKnown RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 PDE8BO95263 885 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 ALDH1A1P00352 501 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 CASQ1P31415 396 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 IREB2P48200 963 aaKnown RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 CAP1Q01518 475 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 CHAF1AQ13111 956 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 CRHR2Q13324 411 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 TNFAIP1Q13829 316 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 ZC3H12AQ5D1E8 599 aaKnown RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 METTL24Q5JXM2 366 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 ICE2Q659A1 982 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 FBXO46Q6PJ61 603 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 ZNF771Q7L3S4 317 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 GET4Q7L5D6 327 aaPredicted RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 CALR3Q96L12 384 aaKnown RBP6.95□□□□□ -1.3
TRA2B-211ENST00000477939 FEZ1Q99689 392 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 PTPN18Q99952 460 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 TMEM39BQ9GZU3 492 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 USP44Q9H0E7 712 aa6.95□□□□□ -1.3
TRA2B-211ENST00000477939 SH3BP5O60239 455 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 MS4A1P11836 297 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 FGFR2P21802 821 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 GUCY2CP25092 1073 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 RFX5P48382 616 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-211ENST00000477939 BCAMP50895 628 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 CACNB3P54284 484 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 INHBEP58166 350 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 SLFN5Q08AF3 891 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 VGLL4Q14135 290 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 PUM3Q15397 648 aaKnown RBP6.94□□□□□ -1.3
TRA2B-211ENST00000477939 C11orf91Q3C1V1 193 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 HS1BP3Q53T59 392 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 ZFYVE27Q5T4F4 411 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-211ENST00000477939 OTOP1Q7RTM1 612 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 VPS37DQ86XT2 251 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.94□□□□□ -1.3
TRA2B-211ENST00000477939 OPTNQ96CV9 577 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 CDCA7LQ96GN5 454 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 MS4A4AQ96JQ5 239 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 ELP3Q9H9T3 547 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 METTL14Q9HCE5 456 aaKnown RBP6.94□□□□□ -1.3
TRA2B-211ENST00000477939 TRIM17Q9Y577 477 aa6.94□□□□□ -1.3
TRA2B-211ENST00000477939 RANBP2P49792 3224 aaKnown RBP6.94□□□□□ -1.3
TRA2B-211ENST00000477939 RPAP1Q9BWH6 1393 aaPredicted RBP6.94□□□□□ -1.3
TRA2B-211ENST00000477939 DOCK2Q92608 1830 aa6.93□□□□□ -1.3
TRA2B-211ENST00000477939 ANKRD62A6NC57 917 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms