RNA–Protein interactions for RNA: ENST00000467931.1

COL1A2-204, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 713 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-204ENST00000467931 TTC39AQ5SRH9 613 aa23.3■■□□□ 1.32
COL1A2-204ENST00000467931 DPF3Q92784 378 aa23.3■■□□□ 1.32
COL1A2-204ENST00000467931 OSBPL5Q9H0X9 879 aaPredicted RBP23.3■■□□□ 1.32
COL1A2-204ENST00000467931 TAOK2Q9UL54 1235 aa23.3■■□□□ 1.32
COL1A2-204ENST00000467931 AGTPBP1Q9UPW5 1226 aa23.3■■□□□ 1.32
COL1A2-204ENST00000467931 SIPA1L1O43166 1804 aa23.3■■□□□ 1.32
COL1A2-204ENST00000467931 COL2A1P02458 1487 aaPredicted RBP23.3■■□□□ 1.32
COL1A2-204ENST00000467931 H0YGN5 161 aa23.29■■□□□ 1.32
COL1A2-204ENST00000467931 ADCY3O60266 1144 aa23.29■■□□□ 1.32
COL1A2-204ENST00000467931 NPM3O75607 178 aaKnown RBP23.29■■□□□ 1.32
COL1A2-204ENST00000467931 SNRKQ9NRH2 765 aa23.29■■□□□ 1.32
COL1A2-204ENST00000467931 PNMA3Q9UL41 463 aa23.29■■□□□ 1.32
COL1A2-204ENST00000467931 COLQQ9Y215 455 aaPredicted RBP23.29■■□□□ 1.32
COL1A2-204ENST00000467931 GJB1P08034 283 aa23.28■■□□□ 1.32
COL1A2-204ENST00000467931 GJA8P48165 433 aa23.28■■□□□ 1.32
COL1A2-204ENST00000467931 FLT3LGP49771 235 aa23.28■■□□□ 1.32
COL1A2-204ENST00000467931 TREML2Q5T2D2 321 aa23.28■■□□□ 1.32
COL1A2-204ENST00000467931 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
COL1A2-204ENST00000467931 ANKRD13CQ8N6S4 541 aa23.28■■□□□ 1.32
COL1A2-204ENST00000467931 ELNP15502 786 aa23.27■■□□□ 1.32
COL1A2-204ENST00000467931 SPP2Q13103 211 aa23.27■■□□□ 1.32
COL1A2-204ENST00000467931 ZKSCAN2Q63HK3 967 aa23.27■■□□□ 1.32
COL1A2-204ENST00000467931 NAA16Q6N069 864 aaPredicted RBP23.27■■□□□ 1.32
COL1A2-204ENST00000467931 SH3RF3Q8TEJ3 882 aaPredicted RBP23.27■■□□□ 1.32
COL1A2-204ENST00000467931 UNC93B1Q9H1C4 597 aa23.27■■□□□ 1.32
COL1A2-204ENST00000467931 CCDC158Q5M9N0 1113 aa23.26■■□□□ 1.31
COL1A2-204ENST00000467931 PROCA1Q8NCQ7 364 aaPredicted RBP23.26■■□□□ 1.31
COL1A2-204ENST00000467931 ZNF280CQ8ND82 737 aa23.26■■□□□ 1.31
COL1A2-204ENST00000467931 COA7Q96BR5 231 aa23.26■■□□□ 1.31
COL1A2-204ENST00000467931 AATFQ9NY61 560 aaKnown RBP eCLIP23.26■■□□□ 1.31
COL1A2-204ENST00000467931 MYH1P12882 1939 aa23.25■■□□□ 1.31
COL1A2-204ENST00000467931 BAG3O95817 575 aa23.25■■□□□ 1.31
COL1A2-204ENST00000467931 CAP2P40123 477 aa23.25■■□□□ 1.31
COL1A2-204ENST00000467931 HMGCS2P54868 508 aa23.25■■□□□ 1.31
COL1A2-204ENST00000467931 TNNI3KQ59H18 835 aa23.25■■□□□ 1.31
COL1A2-204ENST00000467931 U2AF1L4Q8WU68 220 aaKnown RBP23.25■■□□□ 1.31
COL1A2-204ENST00000467931 HTATIP2Q9BUP3 242 aa23.25■■□□□ 1.31
COL1A2-204ENST00000467931 FPGT-TNNI3KV9GXZ4 949 aa23.25■■□□□ 1.31
COL1A2-204ENST00000467931 INHAP05111 366 aa23.24■■□□□ 1.31
COL1A2-204ENST00000467931 FXR1P51114 621 aaKnown RBP eCLIP23.24■■□□□ 1.31
COL1A2-204ENST00000467931 PABPC4Q13310 644 aaKnown RBP eCLIP23.24■■□□□ 1.31
COL1A2-204ENST00000467931 FTSJ3Q8IY81 847 aaKnown RBP23.24■■□□□ 1.31
COL1A2-204ENST00000467931 DBNDD2Q9BQY9 259 aa23.24■■□□□ 1.31
COL1A2-204ENST00000467931 TRIM34Q9BYJ4 488 aa23.24■■□□□ 1.31
COL1A2-204ENST00000467931 TBC1D2Q9BYX2 928 aa23.24■■□□□ 1.31
COL1A2-204ENST00000467931 C1orf115Q9H7X2 142 aa23.24■■□□□ 1.31
COL1A2-204ENST00000467931 AS3MTQ9HBK9 375 aa23.24■■□□□ 1.31
COL1A2-204ENST00000467931 HERC5Q9UII4 1024 aaKnown RBP23.24■■□□□ 1.31
COL1A2-204ENST00000467931 USP17L5A8MUK1 530 aa23.23■■□□□ 1.31
COL1A2-204ENST00000467931 SURF6O75683 361 aaKnown RBP23.23■■□□□ 1.31
COL1A2-204ENST00000467931 FARP2O94887 1054 aaPredicted RBP23.23■■□□□ 1.31
COL1A2-204ENST00000467931 PLCG2P16885 1265 aa23.23■■□□□ 1.31
COL1A2-204ENST00000467931 FAM110CQ1W6H9 321 aa23.23■■□□□ 1.31
COL1A2-204ENST00000467931 TRIOBPQ9H2D6 2365 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 POLA2Q14181 598 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 CHRDL2Q6WN34 429 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 MAPKAPK5Q8IW41 473 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 PXYLP1Q8TE99 480 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 TGFBRAP1Q8WUH2 860 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 GPR108Q9NPR9 543 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 PI4KBQ9UBF8 816 aa23.22■■□□□ 1.31
COL1A2-204ENST00000467931 GCLCP48506 637 aaPredicted RBP23.21■■□□□ 1.31
COL1A2-204ENST00000467931 IRF5Q13568 498 aa23.21■■□□□ 1.31
COL1A2-204ENST00000467931 RRP1BQ14684 758 aaKnown RBP23.21■■□□□ 1.31
COL1A2-204ENST00000467931 ITPRIPQ8IWB1 547 aa23.21■■□□□ 1.31
COL1A2-204ENST00000467931 CRACR2BQ8N4Y2 399 aaPredicted RBP23.21■■□□□ 1.31
COL1A2-204ENST00000467931 DHX36Q9H2U1 1008 aaKnown RBP23.21■■□□□ 1.31
COL1A2-204ENST00000467931 SGPL1O95470 568 aa23.2■■□□□ 1.3
COL1A2-204ENST00000467931 TFRCP02786 760 aaKnown RBP23.2■■□□□ 1.3
COL1A2-204ENST00000467931 ATP8B2P98198 1209 aa23.2■■□□□ 1.3
COL1A2-204ENST00000467931 SSH3Q8TE77 659 aa23.2■■□□□ 1.3
COL1A2-204ENST00000467931 ASCC2Q9H1I8 757 aaPredicted RBP23.2■■□□□ 1.3
COL1A2-204ENST00000467931 FLT1P17948 1338 aa23.19■■□□□ 1.3
COL1A2-204ENST00000467931 CYP2E1P05181 493 aaPredicted RBP23.19■■□□□ 1.3
COL1A2-204ENST00000467931 IRX3P78415 501 aaPredicted RBP23.19■■□□□ 1.3
COL1A2-204ENST00000467931 MTMR2Q13614 643 aa23.19■■□□□ 1.3
COL1A2-204ENST00000467931 ADGRA1Q86SQ6 560 aa23.19■■□□□ 1.3
COL1A2-204ENST00000467931 DEFB118Q96PH6 123 aa23.19■■□□□ 1.3
COL1A2-204ENST00000467931 TMOD4Q9NZQ9 345 aa23.19■■□□□ 1.3
COL1A2-204ENST00000467931 PLXNB2O15031 1838 aa23.18■■□□□ 1.3
COL1A2-204ENST00000467931 ZAP70P43403 619 aa23.18■■□□□ 1.3
COL1A2-204ENST00000467931 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
COL1A2-204ENST00000467931 UBE2Q1Q7Z7E8 422 aa23.18■■□□□ 1.3
COL1A2-204ENST00000467931 SAP30BPQ9UHR5 308 aaKnown RBP23.18■■□□□ 1.3
COL1A2-204ENST00000467931 NR2E3Q9Y5X4 410 aa23.18■■□□□ 1.3
COL1A2-204ENST00000467931 ALPK3Q96L96 1907 aa23.18■■□□□ 1.3
COL1A2-204ENST00000467931 GDF11O95390 407 aa23.17■■□□□ 1.3
COL1A2-204ENST00000467931 ASNSP08243 561 aa23.17■■□□□ 1.3
COL1A2-204ENST00000467931 CCDC8Q9H0W5 538 aaPredicted RBP23.17■■□□□ 1.3
COL1A2-204ENST00000467931 PALD1Q9ULE6 856 aa23.17■■□□□ 1.3
COL1A2-204ENST00000467931 HLA-DOAP06340 250 aa23.16■■□□□ 1.3
COL1A2-204ENST00000467931 PPP4CP60510 307 aa23.16■■□□□ 1.3
COL1A2-204ENST00000467931 SH3D19Q5HYK7 790 aa23.16■■□□□ 1.3
COL1A2-204ENST00000467931 PIH1D3Q9NQM4 214 aaKnown RBP23.16■■□□□ 1.3
COL1A2-204ENST00000467931 TLR7Q9NYK1 1049 aaKnown RBP23.16■■□□□ 1.3
COL1A2-204ENST00000467931 IDH1O75874 414 aaKnown RBP23.15■■□□□ 1.3
COL1A2-204ENST00000467931 CYP7A1P22680 504 aa23.15■■□□□ 1.3
COL1A2-204ENST00000467931 BACE1P56817 501 aa23.15■■□□□ 1.3
COL1A2-204ENST00000467931 DYNLL1P63167 89 aaKnown RBP23.15■■□□□ 1.3
COL1A2-204ENST00000467931 WDR18Q9BV38 432 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms