RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 GJD3Q8N144 294 aa9.8□□□□□ -0.84
PTPRK-211ENST00000429595 C12orf50Q8NA57 414 aaPredicted RBP9.8□□□□□ -0.84
PTPRK-211ENST00000429595 FMNL2Q96PY5 1086 aa9.8□□□□□ -0.84
PTPRK-211ENST00000429595 NRSN2Q9GZP1 204 aa9.8□□□□□ -0.84
PTPRK-211ENST00000429595 DIP2AQ14689 1571 aa9.8□□□□□ -0.84
PTPRK-211ENST00000429595 PAX4O43316 350 aa9.79□□□□□ -0.84
PTPRK-211ENST00000429595 FAM13AO94988 1023 aa9.79□□□□□ -0.84
PTPRK-211ENST00000429595 F13BP05160 661 aa9.79□□□□□ -0.84
PTPRK-211ENST00000429595 EHHADHQ08426 723 aa9.79□□□□□ -0.84
PTPRK-211ENST00000429595 AMOTL2Q9Y2J4 779 aa9.79□□□□□ -0.84
PTPRK-211ENST00000429595 CASKIN1Q8WXD9 1431 aa9.79□□□□□ -0.84
PTPRK-211ENST00000429595 MBD5Q9P267 1494 aa9.79□□□□□ -0.84
PTPRK-211ENST00000429595 NHSL1Q5SYE7 1610 aa9.78□□□□□ -0.84
PTPRK-211ENST00000429595 PNPLA6Q8IY17 1366 aa9.78□□□□□ -0.84
PTPRK-211ENST00000429595 TET3O43151 1660 aa9.78□□□□□ -0.84
PTPRK-211ENST00000429595 POLR3DP05423 398 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-211ENST00000429595 DRD2P14416 443 aa9.78□□□□□ -0.84
PTPRK-211ENST00000429595 R3HDM1Q15032 1099 aaKnown RBP9.78□□□□□ -0.84
PTPRK-211ENST00000429595 ZFYVE28Q9HCC9 887 aa9.78□□□□□ -0.84
PTPRK-211ENST00000429595 ANO2Q9NQ90 1003 aa9.78□□□□□ -0.84
PTPRK-211ENST00000429595 PPP1R1BQ9UD71 204 aaPredicted RBP9.78□□□□□ -0.84
PTPRK-211ENST00000429595 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.84
PTPRK-211ENST00000429595 ATRNO75882 1429 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 WNT11O96014 354 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 USP5P45974 858 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 C1QTNF8P60827 252 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 ZNF211Q13398 564 aaPredicted RBP9.77□□□□□ -0.85
PTPRK-211ENST00000429595 IDI1Q13907 227 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 CDPF1Q6NVV7 123 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 FBXL6Q8N531 539 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 C1orf115Q9H7X2 142 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 CYP4F12Q9HCS2 524 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 PIM2Q9P1W9 311 aa9.77□□□□□ -0.85
PTPRK-211ENST00000429595 MTUS2Q5JR59 1369 aa9.76□□□□□ -0.85
PTPRK-211ENST00000429595 FKBP4Q02790 459 aaKnown RBP eCLIP9.76□□□□□ -0.85
PTPRK-211ENST00000429595 GSTM4Q03013 218 aa9.76□□□□□ -0.85
PTPRK-211ENST00000429595 C2CD4AQ8NCU7 369 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-211ENST00000429595 TBX22Q9Y458 520 aa9.76□□□□□ -0.85
PTPRK-211ENST00000429595 CCDC141Q6ZP82 1450 aa9.76□□□□□ -0.85
PTPRK-211ENST00000429595 PIK3C2BO00750 1634 aa9.75□□□□□ -0.85
PTPRK-211ENST00000429595 MROH1Q8NDA8 1641 aa9.75□□□□□ -0.85
PTPRK-211ENST00000429595 CTSBP07858 339 aa9.75□□□□□ -0.85
PTPRK-211ENST00000429595 MSMPQ1L6U9 139 aa9.75□□□□□ -0.85
PTPRK-211ENST00000429595 EXOSC6Q5RKV6 272 aaKnown RBP9.75□□□□□ -0.85
PTPRK-211ENST00000429595 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
PTPRK-211ENST00000429595 DDX17Q92841 729 aaKnown RBP9.75□□□□□ -0.85
PTPRK-211ENST00000429595 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.75□□□□□ -0.85
PTPRK-211ENST00000429595 PTCH1Q13635 1447 aa9.74□□□□□ -0.85
PTPRK-211ENST00000429595 ASXL1Q8IXJ9 1541 aa9.74□□□□□ -0.85
PTPRK-211ENST00000429595 FAM95CA0A1B0GW59 222 aa9.74□□□□□ -0.85
PTPRK-211ENST00000429595 ABL1P00519 1130 aa9.74□□□□□ -0.85
PTPRK-211ENST00000429595 ADGRE2Q9UHX3 823 aa9.74□□□□□ -0.85
PTPRK-211ENST00000429595 A0A1W2PP55 124 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 ADMP35318 185 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 GRIA4P48058 902 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 ZNF423Q2M1K9 1284 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 CCNJLQ8IV13 435 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 TCF12Q99081 682 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 ATG3Q9NT62 314 aa9.73□□□□□ -0.85
PTPRK-211ENST00000429595 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
PTPRK-211ENST00000429595 MAST1Q9Y2H9 1570 aa9.72□□□□□ -0.85
PTPRK-211ENST00000429595 SOX4Q06945 474 aaPredicted RBP9.72□□□□□ -0.85
PTPRK-211ENST00000429595 NFKBIBQ15653 356 aa9.72□□□□□ -0.85
PTPRK-211ENST00000429595 SPRED3Q2MJR0 410 aa9.72□□□□□ -0.85
PTPRK-211ENST00000429595 LEMD3Q9Y2U8 911 aa9.72□□□□□ -0.85
PTPRK-211ENST00000429595 ARHGAP31Q2M1Z3 1444 aa9.72□□□□□ -0.85
PTPRK-211ENST00000429595 CAMSAP2Q08AD1 1489 aa9.72□□□□□ -0.85
PTPRK-211ENST00000429595 A0A096LPE4 126 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 A0A1W2PPZ6 126 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 ADH5P11766 374 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 FOSL1P15407 271 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 PCDH1Q08174 1060 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 KRT27Q7Z3Y8 459 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 ABI1Q8IZP0 508 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
PTPRK-211ENST00000429595 EZH1Q92800 747 aaPredicted RBP9.71□□□□□ -0.86
PTPRK-211ENST00000429595 GATA6Q92908 595 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 OSBPL1AQ9BXW6 950 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 MTMR7Q9Y216 660 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 KANK1Q14678 1352 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 PLEKHG1Q9ULL1 1385 aa9.71□□□□□ -0.86
PTPRK-211ENST00000429595 CEP152O94986 1710 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 TXKP42681 527 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 USP11P51784 963 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 ECM1Q16610 540 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 USPL1Q5W0Q7 1092 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 PAOXQ6QHF9 649 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 CLEC4MQ9H2X3 399 aaPredicted RBP9.7□□□□□ -0.86
PTPRK-211ENST00000429595 SLC52A1Q9NWF4 448 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 PRKAG2Q9UGJ0 569 aa9.7□□□□□ -0.86
PTPRK-211ENST00000429595 CCDC9Q9Y3X0 531 aaKnown RBP9.7□□□□□ -0.86
PTPRK-211ENST00000429595 UNC13BO14795 1591 aa9.69□□□□□ -0.86
PTPRK-211ENST00000429595 DCCP43146 1447 aa9.69□□□□□ -0.86
PTPRK-211ENST00000429595 BCL9LQ86UU0 1499 aa9.69□□□□□ -0.86
PTPRK-211ENST00000429595 UNC5CLQ8IV45 518 aa9.69□□□□□ -0.86
PTPRK-211ENST00000429595 GIMAP7Q8NHV1 300 aa9.69□□□□□ -0.86
PTPRK-211ENST00000429595 FYCO1Q9BQS8 1478 aa9.69□□□□□ -0.86
PTPRK-211ENST00000429595 LIN7BQ9HAP6 207 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms