RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	MMP14	P50281	582 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	UBXN2A	P68543	259 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TRIM32	Q13049	653 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	SWT1	Q5T5J6	900 aa	Known RBP	11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	WRNIP1	Q96S55	665 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	CSAD	Q9Y600	493 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651		A0A1B0GUL6	1792 aa		11.17	□□□□□ -0.62
NIF3L1-206	ENST00000416651	FLT3LG	P49771	235 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	PPIL2	Q13356	520 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	SNAPC2	Q13487	334 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	GPAT2	Q6NUI2	795 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MIGA2	Q7L4E1	593 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	ERO1B	Q86YB8	467 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	SLF2	Q8IX21	1173 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	DZIP1L	Q8IYY4	767 aa	Known RBP	11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	PAK6	Q9NQU5	681 aa	Predicted RBP	11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MAP3K2	Q9Y2U5	619 aa		11.16	□□□□□ -0.62
NIF3L1-206	ENST00000416651	SLURP2	P0DP57	97 aa		11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	IGHMBP2	P38935	993 aa	Known RBP	11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	KCNJ4	P48050	445 aa		11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MDM2	Q00987	491 aa	Predicted RBP	11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	UBE3B	Q7Z3V4	1068 aa		11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	KCNV2	Q8TDN2	545 aa		11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	UBE2O	Q9C0C9	1292 aa	Known RBP	11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	MBIP	Q9NS73	344 aa		11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	TTF2	Q9UNY4	1162 aa	Known RBP	11.15	□□□□□ -0.62
NIF3L1-206	ENST00000416651	LAMA2	P24043	3122 aa	Known RBP	11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651		H7C1W4	665 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PLIN1	O60240	522 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	HOXD10	P28358	340 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	CRK	P46108	304 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	TRIM67	Q6ZTA4	783 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	G2E3	Q7L622	706 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	ANKRD23	Q86SG2	305 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	C8orf58	Q8NAV2	365 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	ANKRD2	Q9GZV1	360 aa		11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	DDX60L	Q5H9U9	1706 aa	Known RBP	11.14	□□□□□ -0.63
NIF3L1-206	ENST00000416651	CLSPN	Q9HAW4	1339 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PI4KAP2	A4QPH2	592 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	HOXB7	P09629	217 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	SLC19A1	P41440	591 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	CASP7	P55210	303 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	FCGRT	P55899	365 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	MFSD14B	Q5SR56	506 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	NECAB2	Q7Z6G3	386 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PI4KAP1	Q8N8J0	262 aa		11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	ZNF594	Q96JF6	807 aa	Predicted RBP	11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	ZCCHC17	Q9NP64	241 aa	Known RBP	11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	11.13	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PFAS	O15067	1338 aa		11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	NEURL1B	A8MQ27	555 aa		11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	HSP90B1	P14625	803 aa	Known RBP	11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	GYG1	P46976	350 aa		11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	FKBP1A	P62942	108 aa	Known RBP	11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PADI6	Q6TGC4	694 aa		11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	C15orf52	Q6ZUT6	534 aa	Known RBP	11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	MPHOSPH8	Q99549	860 aa		11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	CDX2	Q99626	313 aa	Predicted RBP	11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.12	□□□□□ -0.63
NIF3L1-206	ENST00000416651	CSF1R	P07333	972 aa		11.11	□□□□□ -0.63
NIF3L1-206	ENST00000416651	MLLT3	P42568	568 aa	Predicted RBP	11.11	□□□□□ -0.63
NIF3L1-206	ENST00000416651	TNFAIP1	Q13829	316 aa		11.11	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PKDCC	Q504Y2	493 aa		11.11	□□□□□ -0.63
NIF3L1-206	ENST00000416651	TSPYL6	Q8N831	410 aa		11.11	□□□□□ -0.63
NIF3L1-206	ENST00000416651	MYLIP	Q8WY64	445 aa		11.11	□□□□□ -0.63
NIF3L1-206	ENST00000416651	KCNH4	Q9UQ05	1017 aa		11.11	□□□□□ -0.63
NIF3L1-206	ENST00000416651	FAM205A	Q6ZU69	1335 aa		11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	RNF223	E7ERA6	249 aa		11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	WDHD1	O75717	1129 aa	Predicted RBP	11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	SLC4A3	P48751	1232 aa		11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PPAT	Q06203	517 aa		11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	ZNF804A	Q7Z570	1209 aa		11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	CCDC84	Q86UT8	332 aa	Predicted RBP	11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	TDRD7	Q8NHU6	1098 aa	Known RBP	11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	MAFA	Q8NHW3	353 aa	Predicted RBP	11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	SERPINA10	Q9UK55	444 aa		11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PCDHB3	Q9Y5E6	796 aa		11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	COL2A1	P02458	1487 aa	Predicted RBP	11.1	□□□□□ -0.63
NIF3L1-206	ENST00000416651	MUC3A	Q02505	3323 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PEX10	O60683	326 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	ZNF853	P0CG23	659 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	LRRC26	Q2I0M4	334 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	EPHA10	Q5JZY3	1008 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	KSR2	Q6VAB6	950 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	USP38	Q8NB14	1042 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	PXYLP1	Q8TE99	480 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	EMID1	Q96A84	441 aa	Predicted RBP	11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	FAM84B	Q96KN1	310 aa	Predicted RBP	11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	TTYH1	Q9H313	450 aa	Predicted RBP	11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	C11orf49	Q9H6J7	331 aa		11.09	□□□□□ -0.63
NIF3L1-206	ENST00000416651	TNPO2	O14787	897 aa	Known RBP	11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	DGAT1	O75907	488 aa		11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	TNNI2	P48788	182 aa		11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	FOXO4	P98177	505 aa		11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	LMOD3	Q0VAK6	560 aa		11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	CHAF1A	Q13111	956 aa	Predicted RBP	11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	IRF5	Q13568	498 aa		11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.08	□□□□□ -0.64
NIF3L1-206	ENST00000416651	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms