RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 KIF22Q14807 665 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 AACSQ86V21 672 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 FOXP4Q8IVH2 680 aaPredicted RBP17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 TEX11Q8IYF3 940 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 OSBPL5Q9H0X9 879 aaPredicted RBP17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 TRIM17Q9Y577 477 aa17.73■□□□□ 0.43
NIF3L1-205ENST00000409588 PTPRAP18433 802 aa17.72■□□□□ 0.43
NIF3L1-205ENST00000409588 MAP3K12Q12852 859 aa17.72■□□□□ 0.43
NIF3L1-205ENST00000409588 OTOP1Q7RTM1 612 aa17.72■□□□□ 0.43
NIF3L1-205ENST00000409588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.72■□□□□ 0.43
NIF3L1-205ENST00000409588 ZHX2Q9Y6X8 837 aa17.72■□□□□ 0.43
NIF3L1-205ENST00000409588 IFIT2P09913 472 aaKnown RBP17.71■□□□□ 0.43
NIF3L1-205ENST00000409588 GINM1Q9NU53 330 aa17.71■□□□□ 0.43
NIF3L1-205ENST00000409588 AATFQ9NY61 560 aaKnown RBP eCLIP17.71■□□□□ 0.43
NIF3L1-205ENST00000409588 PTPN22Q9Y2R2 807 aa17.71■□□□□ 0.43
NIF3L1-205ENST00000409588 SLC45A1Q9Y2W3 748 aa17.71■□□□□ 0.43
NIF3L1-205ENST00000409588 AFG3L2Q9Y4W6 797 aa17.71■□□□□ 0.43
NIF3L1-205ENST00000409588 CLCN6P51797 869 aa17.7■□□□□ 0.42
NIF3L1-205ENST00000409588 PRMT2P55345 433 aa17.7■□□□□ 0.42
NIF3L1-205ENST00000409588 SH3RF3Q8TEJ3 882 aaPredicted RBP17.7■□□□□ 0.42
NIF3L1-205ENST00000409588 A0A0G2JLL6 359 aaPredicted RBP17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 PDHXO00330 501 aa17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 IDH1O75874 414 aaKnown RBP17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 PRRT2Q7Z6L0 340 aaPredicted RBP17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 METTL16Q86W50 562 aaKnown RBP17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 SIRT2Q8IXJ6 389 aa17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 CD99L2Q8TCZ2 262 aa17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 PIH1D3Q9NQM4 214 aaKnown RBP17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 TLR7Q9NYK1 1049 aaKnown RBP17.69■□□□□ 0.42
NIF3L1-205ENST00000409588 CYP7A1P22680 504 aa17.68■□□□□ 0.42
NIF3L1-205ENST00000409588 C17orf99Q6UX52 265 aa17.68■□□□□ 0.42
NIF3L1-205ENST00000409588 NBPF11Q86T75 865 aa17.68■□□□□ 0.42
NIF3L1-205ENST00000409588 TGFBRAP1Q8WUH2 860 aa17.68■□□□□ 0.42
NIF3L1-205ENST00000409588 PARK7Q99497 189 aaKnown RBP17.68■□□□□ 0.42
NIF3L1-205ENST00000409588 IL1RAPL2Q9NP60 686 aa17.68■□□□□ 0.42
NIF3L1-205ENST00000409588 HOXD10P28358 340 aa17.67■□□□□ 0.42
NIF3L1-205ENST00000409588 CAP2P40123 477 aa17.67■□□□□ 0.42
NIF3L1-205ENST00000409588 MOGSQ13724 837 aa17.67■□□□□ 0.42
NIF3L1-205ENST00000409588 HLA-DOAP06340 250 aa17.66■□□□□ 0.42
NIF3L1-205ENST00000409588 LACTBP83111 547 aaPredicted RBP17.66■□□□□ 0.42
NIF3L1-205ENST00000409588 MAGEB6Q8N7X4 407 aa17.66■□□□□ 0.42
NIF3L1-205ENST00000409588 TRIM34Q9BYJ4 488 aa17.66■□□□□ 0.42
NIF3L1-205ENST00000409588 AS3MTQ9HBK9 375 aa17.66■□□□□ 0.42
NIF3L1-205ENST00000409588 TAOK2Q9UL54 1235 aa17.66■□□□□ 0.42
NIF3L1-205ENST00000409588 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 USP17L5A8MUK1 530 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 ASNSP08243 561 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 PABPC4Q13310 644 aaKnown RBP eCLIP17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 GPAT2Q6NUI2 795 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 ADGRA1Q86SQ6 560 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 PROCA1Q8NCQ7 364 aaPredicted RBP17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 ZNF280CQ8ND82 737 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 LRRCC1Q9C099 1032 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 FLT1P17948 1338 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 DOCK2Q92608 1830 aa17.65■□□□□ 0.42
NIF3L1-205ENST00000409588 ATP5JP18859 108 aa17.64■□□□□ 0.41
NIF3L1-205ENST00000409588 TTC6Q86TZ1 520 aa17.64■□□□□ 0.41
NIF3L1-205ENST00000409588 CRACR2BQ8N4Y2 399 aaPredicted RBP17.64■□□□□ 0.41
NIF3L1-205ENST00000409588 ARMC5Q96C12 935 aa17.64■□□□□ 0.41
NIF3L1-205ENST00000409588 PNMA3Q9UL41 463 aa17.64■□□□□ 0.41
NIF3L1-205ENST00000409588 USP5P45974 858 aa17.63■□□□□ 0.41
NIF3L1-205ENST00000409588 SLC9C2Q5TAH2 1124 aa17.63■□□□□ 0.41
NIF3L1-205ENST00000409588 MAPKAPK5Q8IW41 473 aa17.63■□□□□ 0.41
NIF3L1-205ENST00000409588 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
NIF3L1-205ENST00000409588 WDR18Q9BV38 432 aa17.63■□□□□ 0.41
NIF3L1-205ENST00000409588 ANTXR1Q9H6X2 564 aa17.63■□□□□ 0.41
NIF3L1-205ENST00000409588 AGTPBP1Q9UPW5 1226 aa17.63■□□□□ 0.41
NIF3L1-205ENST00000409588 MAST2Q6P0Q8 1798 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 TRIM75PA6NK02 468 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 C19orf81C9J6K1 198 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 APBB1O00213 710 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 SPP2Q13103 211 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 SH3D19Q5HYK7 790 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 C20orf194Q5TEA3 1177 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 EHD4Q9H223 541 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 PALD1Q9ULE6 856 aa17.62■□□□□ 0.41
NIF3L1-205ENST00000409588 MAGEB6P1A0A0J9YX57 407 aa17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 SOX10P56693 466 aa17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 DYNLL1P63167 89 aaKnown RBP17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 GADL1Q6ZQY3 521 aa17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 CPA4Q9UI42 421 aa17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 SERPINB13Q9UIV8 391 aa17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 ADGRA2Q96PE1 1338 aa17.61■□□□□ 0.41
NIF3L1-205ENST00000409588 BCRP11274 1271 aa17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 PSMC4P43686 418 aa17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 SLC9C1Q4G0N8 1177 aa17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 ZSCAN25Q6NSZ9 544 aa17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 MIGA1Q8NAN2 632 aa17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 HAUS7Q99871 368 aa17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 RIOK1Q9BRS2 568 aaKnown RBP17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 PAG1Q9NWQ8 432 aa17.6■□□□□ 0.41
NIF3L1-205ENST00000409588 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 GOLIM4O00461 696 aa17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 FMNL1O95466 1100 aaPredicted RBP17.59■□□□□ 0.41
NIF3L1-205ENST00000409588 PDE6AP16499 860 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms