RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 TMX4Q9H1E5 349 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 GOPCQ9HD26 462 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 ORC3Q9UBD5 711 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 RTL9Q8NET4 1388 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 ERVV-1B6SEH8 477 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 F6X3S4 739 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 N4BP3O15049 544 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 CHUKO15111 745 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 SLC8A1P32418 973 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 SYKP43405 635 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 SF3A3Q12874 501 aaKnown RBP eCLIP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 PPFIA1Q13136 1202 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 SNCBQ16143 134 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 BEND3Q5T5X7 828 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC102BQ68D86 513 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 TTC19Q6DKK2 380 aaPredicted RBP6.63□□□□□ -1.35
HDAC9-203ENST00000406072 AACSQ86V21 672 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 LMNTD2Q8IXW0 634 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 WDR66Q8TBY9 1149 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 PLA2G12BQ9BX93 195 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 ATG3Q9NT62 314 aa6.63□□□□□ -1.35
HDAC9-203ENST00000406072 ERCC3P19447 782 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 VAV2P52735 878 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 FANCCQ00597 558 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 DBN1Q16643 649 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 KSR2Q6VAB6 950 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 MARCH10Q8NA82 808 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 ARMC2Q8NEN0 867 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 IFT81Q8WYA0 676 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC151A5D8V7 595 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC160A6NGH7 325 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 SMIM24O75264 130 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 PDE6BP35913 854 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 EPS15P42566 896 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 ARID5BQ14865 1188 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 SEPT7Q16181 437 aaKnown RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 DDB1Q16531 1140 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 ANKRD44Q8N8A2 993 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 SMARCC2Q8TAQ2 1214 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 KIF1BPQ96EK5 621 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 SAAL1Q96ER3 474 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 PPP1R13BQ96KQ4 1090 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 AFF2P51816 1311 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 AOX1Q06278 1338 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 CDHR2Q9BYE9 1310 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 PSDA5PKW4 1024 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 ATP1A2P50993 1020 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 LACTBP83111 547 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 POLA2Q14181 598 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 SND1Q7KZF4 910 aaKnown RBP eCLIP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 RNF168Q8IYW5 571 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 EHBP1Q8NDI1 1231 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 NAPGQ99747 312 aaPredicted RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 GNL3LQ9NVN8 582 aaKnown RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 USP21Q9UK80 565 aa6.62□□□□□ -1.35
HDAC9-203ENST00000406072 MYH14Q7Z406 1995 aaKnown RBP6.62□□□□□ -1.35
HDAC9-203ENST00000406072 USP42Q9H9J4 1324 aaKnown RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 A0A1B0GVL5 298 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 ANKRD62A6NC57 917 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 E7EVH7 732 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 RNF40O75150 1001 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 PPP1R7Q15435 360 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 MUM1L1Q5H9M0 696 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 IQCA1Q86XH1 822 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 PIGBQ92521 554 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 TMOD3Q9NYL9 352 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 DONSONQ9NYP3 566 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 SWAP70Q9UH65 585 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 IFT88Q13099 833 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 HDGFL1Q5TGJ6 251 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 NFATC2IPQ8NCF5 419 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 PLBD2Q8NHP8 589 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 LEO1Q8WVC0 666 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 TANGO6Q9C0B7 1094 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 PPANQ9NQ55 473 aaKnown RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 FAM169AQ9Y6X4 670 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 LTBP1Q14766 1721 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 XBP1P17861 261 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 CHMLP26374 656 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 MXRA7P84157 204 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 APOBRQ0VD83 1088 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 UBE4AQ14139 1066 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 TRIM68Q6AZZ1 485 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 CC2D1AQ6P1N0 951 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 MEIS3Q99687 375 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 EPC1Q9H2F5 836 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 TPX2Q9ULW0 747 aaKnown RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 ERICH2A1L162 156 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 ANKRD18BA2A2Z9 1011 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 DDX58O95786 925 aaKnown RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 CLTAP09496 248 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 IL6STP40189 918 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 MYL5Q02045 173 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 ACTN3Q08043 901 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 TUBB2AQ13885 445 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 TTC5Q8N0Z6 440 aa6.61□□□□□ -1.35
HDAC9-203ENST00000406072 ZNF496Q96IT1 587 aaPredicted RBP6.61□□□□□ -1.35
HDAC9-203ENST00000406072 ALS2CR12Q96Q35 445 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms