RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 IKBKEQ14164 716 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 SUZ12Q15022 739 aaKnown RBP7□□□□□ -1.29
ECHDC1-204ENST00000368292 ALG1LQ6GMV1 187 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 TMEM130Q8N3G9 435 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 SLC7A3Q8WY07 619 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 OSBPL7Q9BZF2 842 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 CLEC4MQ9H2X3 399 aaPredicted RBP7□□□□□ -1.29
ECHDC1-204ENST00000368292 NLRP2Q9NX02 1062 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 ATRNO75882 1429 aa7□□□□□ -1.29
ECHDC1-204ENST00000368292 LDHBP07195 334 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 GATA4P43694 442 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 PTPN12Q05209 780 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 PCDH1Q08174 1060 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 C19orf57Q0VDD7 668 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 MRPL58Q14197 206 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 NXPE4Q6UWF7 544 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 DCAF11Q8TEB1 546 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 ZNF576Q9H609 170 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 USP21Q9UK80 565 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 TRAK1Q9UPV9 953 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 SETD5Q9C0A6 1442 aa6.99□□□□□ -1.29
ECHDC1-204ENST00000368292 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 ERVK-7P63135 1459 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 F8W735 103 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 ALX3O95076 343 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 NOS3P29474 1203 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 LDLRAD1Q5T700 205 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 KIAA1211Q6ZU35 1233 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 TXNRD3Q86VQ6 643 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 WFDC12Q8WWY7 111 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 DUSP9Q99956 384 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 NRSN2Q9GZP1 204 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 SOX17Q9H6I2 414 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 PARP2Q9UGN5 583 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 RTEL1-TNFRSF6BF6WH68 1400 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 UNC13BO14795 1591 aa6.98□□□□□ -1.29
ECHDC1-204ENST00000368292 PNPLA6Q8IY17 1366 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 GPATCH8Q9UKJ3 1502 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 TCF3P15923 654 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 IREB2P48200 963 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 HNRNPMP52272 730 aaKnown RBP eCLIP6.97□□□□□ -1.293e-8■■■■■ 29
ECHDC1-204ENST00000368292 FCGRTP55899 365 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 ATP2B2Q01814 1243 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 FAAP100Q0VG06 881 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 C3orf58Q8NDZ4 430 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 UBASH3BQ8TF42 649 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 FAM161BQ96MY7 647 aa6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-204ENST00000368292 B3GALT4O96024 378 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 ARL4DP49703 201 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 NLRP12P59046 1061 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 RPS26P11Q5JNZ5 115 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 BRINP3Q76B58 766 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 AGGF1Q8N302 714 aaeCLIP6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 BACH2Q9BYV9 841 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 AKTIPQ9H8T0 292 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 CAMSAP2Q08AD1 1489 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 ASXL1Q8IXJ9 1541 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 SPHKAPQ2M3C7 1700 aa6.96□□□□□ -1.3
ECHDC1-204ENST00000368292 CFAP65Q6ZU64 1925 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 CLIP1P30622 1438 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 CHD2O14647 1828 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 DLGAP3O95886 979 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 DAB2P98082 770 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 GSTM4Q03013 218 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 DOC2BQ14184 412 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 DUOXA2Q1HG44 320 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 TSNAXIP1Q2TAA8 658 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 Q6ZS46 218 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 TMC4Q7Z404 712 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 CCDC136Q96JN2 1154 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 MEGF10Q96KG7 1140 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 SLC26A8Q96RN1 970 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 TRIM56Q9BRZ2 755 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 TPSG1Q9NRR2 321 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 PPP4R2Q9NY27 417 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 TRPC5Q9UL62 973 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 UTRNP46939 3433 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 GLI3P10071 1580 aa6.95□□□□□ -1.3
ECHDC1-204ENST00000368292 PIK3C2BO00750 1634 aa6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 MROH1Q8NDA8 1641 aa6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 GIPC1O14908 333 aa6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 ZEB1P37275 1124 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 IRX6P78412 446 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 XPCQ01831 940 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 R3HDM1Q15032 1099 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 DTHD1Q6ZMT9 781 aa6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 ACAD11Q709F0 780 aa6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 NAP1L5Q96NT1 182 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 DHX29Q7Z478 1369 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-204ENST00000368292 LOC100289279A0A1B0GTE1 492 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 KIF3BO15066 747 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 CTSBP07858 339 aa6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 XRCC5P13010 732 aaKnown RBP6.93□□□□□ -1.3
ECHDC1-204ENST00000368292 GNA15P30679 374 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms