RNA–Protein interactions for RNA: ENST00000364447.1

RNU4-59P-201, Transcript of RNA, U4 small nuclear 59, pseudogene, humanhuman

BASIC

Gene RNU4-59P, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-59P-201ENST00000364447 NKX2-3Q8TAU0 364 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 GPR108Q9NPR9 543 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 PNMA3Q9UL41 463 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 AGTPBP1Q9UPW5 1226 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 FPGT-TNNI3KV9GXZ4 949 aa10.04□□□□□ -0.8
RNU4-59P-201ENST00000364447 TNPO2O14787 897 aaKnown RBP10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 CCL5P13501 91 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 PLCG2P16885 1265 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 POLA2Q14181 598 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 MTFR1Q15390 333 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 PROCA1Q8NCQ7 364 aaPredicted RBP10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 SLAIN1Q8ND83 568 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 SSH3Q8TE77 659 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 SH3RF3Q8TEJ3 882 aaPredicted RBP10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 DBNDD2Q9BQY9 259 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 TRIM34Q9BYJ4 488 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 TBC1D2Q9BYX2 928 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 C1orf115Q9H7X2 142 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 HERC5Q9UII4 1024 aaKnown RBP10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 SIPA1L1O43166 1804 aa10.03□□□□□ -0.8
RNU4-59P-201ENST00000364447 ADCY3O60266 1144 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 CAP2P40123 477 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 ATP8B2P98198 1209 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 SPP2Q13103 211 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 PABPC4Q13310 644 aaKnown RBP eCLIP10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 HABP4Q5JVS0 413 aaKnown RBP10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 TREML2Q5T2D2 321 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 ZNF280CQ8ND82 737 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 RNF208Q9H0X6 261 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 DHX36Q9H2U1 1008 aaKnown RBP10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 AS3MTQ9HBK9 375 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 AATFQ9NY61 560 aaKnown RBP eCLIP10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 TAOK2Q9UL54 1235 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 GABRQQ9UN88 632 aa10.02□□□□□ -0.81
RNU4-59P-201ENST00000364447 MYH1P12882 1939 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 BRCA2P51587 3418 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 MKI67P46013 3256 aaKnown RBP10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 USP17L5A8MUK1 530 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 GJB1P08034 283 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 FLT3LGP49771 235 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 HMGCS2P54868 508 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 CRACR2BQ8N4Y2 399 aaPredicted RBP10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 ANKRD13CQ8N6S4 541 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 TGFBRAP1Q8WUH2 860 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 COA7Q96BR5 231 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 SHISA4Q96DD7 197 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 PI4KBQ9UBF8 816 aa10.01□□□□□ -0.81
RNU4-59P-201ENST00000364447 CYP2E1P05181 493 aaPredicted RBP10□□□□□ -0.81
RNU4-59P-201ENST00000364447 ELNP15502 786 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 ZAP70P43403 619 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 GJA8P48165 433 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 GCLCP48506 637 aaPredicted RBP10□□□□□ -0.81
RNU4-59P-201ENST00000364447 FAM110CQ1W6H9 321 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 MAPKAPK5Q8IW41 473 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 ZNF512BQ96KM6 892 aaPredicted RBP10□□□□□ -0.81
RNU4-59P-201ENST00000364447 HTATIP2Q9BUP3 242 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 DOCK3Q8IZD9 2030 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 FLT1P17948 1338 aa10□□□□□ -0.81
RNU4-59P-201ENST00000364447 H0YGN5 161 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 IGSF3O75054 1194 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 IDH1O75874 414 aaKnown RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 INHAP05111 366 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 HLA-DOAP06340 250 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 ASNSP08243 561 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 RLBP1P12271 317 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 CYP7A1P22680 504 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 PPP4CP60510 307 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 IRX3P78415 501 aaPredicted RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 IRF5Q13568 498 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 MTMR2Q13614 643 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 ADGRA1Q86SQ6 560 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 MIER1Q8N108 512 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 PXYLP1Q8TE99 480 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 U2AF1L4Q8WU68 220 aaKnown RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 DPF3Q92784 378 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 CCDC8Q9H0W5 538 aaPredicted RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 UNC93B1Q9H1C4 597 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 ASCC2Q9H1I8 757 aaPredicted RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 PIH1D3Q9NQM4 214 aaKnown RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 TLR7Q9NYK1 1049 aaKnown RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 TMOD4Q9NZQ9 345 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 SAP30BPQ9UHR5 308 aaKnown RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 DBNLQ9UJU6 430 aaKnown RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 PALD1Q9ULE6 856 aa9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 NOP58Q9Y2X3 529 aaKnown RBP9.99□□□□□ -0.81
RNU4-59P-201ENST00000364447 CEP290O15078 2479 aa9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 ZBTB7BO15156 539 aaPredicted RBP9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 FARP2O94887 1054 aaPredicted RBP9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 RRP1BQ14684 758 aaKnown RBP9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 CERS3Q8IU89 383 aa9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 ERC1Q8IUD2 1116 aa9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 FOXP4Q8IVH2 680 aaPredicted RBP9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 WDR18Q9BV38 432 aa9.98□□□□□ -0.81
RNU4-59P-201ENST00000364447 COLQQ9Y215 455 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms