RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 BMS1Q14692 1282 aaKnown RBP8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 LSRQ86X29 649 aaPredicted RBP8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 FMR1NBQ8N0W7 255 aaPredicted RBP8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 OR6P1Q8NGX9 317 aa8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 DCAF11Q8TEB1 546 aa8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 TRIM55Q9BYV6 548 aa8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 PCDHGC5Q9Y5F6 944 aa8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 CORINQ9Y5Q5 1042 aa8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 GRIN2BQ13224 1484 aa8.38□□□□□ -1.07
RNU4-39P-201ENST00000362455 PRR36Q9H6K5 1346 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 DLL1O00548 723 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 HTR3BO95264 441 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 RAC1P63000 192 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 SNRPNP63162 240 aaKnown RBP8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 RAB33AQ14088 237 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 DUOXA2Q1HG44 320 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 TNNI3KQ59H18 835 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 ZC3H12AQ5D1E8 599 aaKnown RBP8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 CYFIP1Q7L576 1253 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 FAM177A1Q8N128 213 aaPredicted RBP8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 RBBP8NLQ8NC74 664 aaPredicted RBP8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 R3HCC1Q9Y3T6 440 aaKnown RBP8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 CSADQ9Y600 493 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 PRDM2Q13029 1718 aa8.37□□□□□ -1.07
RNU4-39P-201ENST00000362455 WISP1O95388 367 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 SLFN14P0C7P3 912 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 C12orf40Q86WS4 652 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 ANTXR1Q9H6X2 564 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 RAD18Q9NS91 495 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 SIRPGQ9P1W8 387 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 SYNJ2O15056 1496 aa8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 MAGI1Q96QZ7 1491 aaPredicted RBP8.36□□□□□ -1.07
RNU4-39P-201ENST00000362455 GAPVD1Q14C86 1478 aa8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 PRAMEF27A3QJZ7 478 aa8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 K7ELQ4 463 aaPredicted RBP8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 PIK3R2O00459 728 aa8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 EXOSC6Q5RKV6 272 aaKnown RBP8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 PLVAPQ9BX97 442 aa8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 CDK11AQ9UQ88 783 aaPredicted RBP8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 TACC3Q9Y6A5 838 aa8.35□□□□□ -1.07
RNU4-39P-201ENST00000362455 SYNGAP1Q96PV0 1343 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 FAM181BA6NEQ2 426 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 MEIS3P2A8K0S8 358 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 U2SURPO15042 1029 aaKnown RBP8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 PLCG1P19174 1290 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 ID3Q02535 119 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 NFE2L2Q16236 605 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 RUFY4Q6ZNE9 571 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 TMPRSS13Q9BYE2 586 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 ACTR10Q9NZ32 417 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 REV1Q9UBZ9 1251 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 HIF3AQ9Y2N7 669 aa8.34□□□□□ -1.07
RNU4-39P-201ENST00000362455 FAM229AH3BQW9 127 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 TMPRSS2O15393 492 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 GRK4P32298 578 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 RING1Q06587 406 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 PDE4BQ07343 736 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 LRRFIP1Q32MZ4 808 aaKnown RBP8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 AKAP4Q5JQC9 854 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 PPM1JQ5JR12 505 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 KIAA1211Q6ZU35 1233 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 ACAD11Q709F0 780 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 PODNQ7Z5L7 613 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 TMEM40Q8WWA1 233 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 MKL1Q969V6 931 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 TNKS2Q9H2K2 1166 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 MKL2Q9ULH7 1088 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 PPP1R9AQ9ULJ8 1098 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
RNU4-39P-201ENST00000362455 ERCC6L2Q5T890 1561 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 GNB5O14775 395 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 PGRP06401 933 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 ERVK-24P63145 666 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 TRIM28Q13263 835 aaKnown RBP8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 MLECQ14165 292 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 CELF2-AS1Q8N7Q2 184 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 BEND7Q8N7W2 519 aaPredicted RBP8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 MRFAP1L1Q96HT8 127 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 CRIM1Q9NZV1 1036 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 GMIPQ9P107 970 aa8.32□□□□□ -1.08
RNU4-39P-201ENST00000362455 SYNJ1O43426 1573 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 MEGF11A6BM72 1044 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 SPDYE3A6NKU9 549 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 DNAJA2O60884 412 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 CASP7P55210 303 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 ETF1P62495 437 aaKnown RBP8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 PPP2R5EQ16537 467 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 TMEM201Q5SNT2 666 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 NUTM2GQ5VZR2 741 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 OVOS1Q6IE37 1185 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 ZNF746Q6NUN9 644 aaPredicted RBP8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 C19orf47Q8N9M1 422 aaKnown RBP8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 SRPK1Q96SB4 655 aaKnown RBP8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 TM9SF2Q99805 663 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 WNT10AQ9GZT5 417 aa8.31□□□□□ -1.08
RNU4-39P-201ENST00000362455 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms