RNA–Protein interactions for RNA: ENST00000345094.7

THUMPD3-201, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene THUMPD3, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-201ENST00000345094 PIP4K2BP78356 416 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 GNL3LQ9NVN8 582 aaKnown RBP12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 LUC7L2Q9Y383 392 aaKnown RBP12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 ZNF609O15014 1411 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 ITGA6P23229 1130 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 IFIT1BQ5T764 474 aaKnown RBP12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 APOA5Q6Q788 366 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 IFT81Q8WYA0 676 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 ABCB6Q9NP58 842 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 MAN1B1Q9UKM7 699 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 AXIN2Q9Y2T1 843 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 CCDC194A0A1B0GVG4 234 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 USP5P45974 858 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 MMRN2Q9H8L6 949 aa12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 RRP15Q9Y3B9 282 aaKnown RBP12.09□□□□□ -0.47
THUMPD3-201ENST00000345094 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 RILPL1Q5EBL4 403 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 PIK3AP1Q6ZUJ8 805 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 ENGASEQ8NFI3 743 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 CTAGE1Q96RT6 745 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 PCDHB6Q9Y5E3 794 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 MYO1CO00159 1063 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 STX10O60499 249 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 STARD3NLO95772 234 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 SCARF1Q14162 830 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 PTPROQ16827 1216 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 SHC4Q6S5L8 630 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 MAATS1Q7Z4T9 603 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 ATRIPQ8WXE1 791 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 RABGGTAQ92696 567 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 EPSTI1Q96J88 318 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 CSRNP2Q9H175 543 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 ZNF446Q9NWS9 450 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 TADA3O75528 432 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 SLC5A1P13866 664 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 PAFAH1B1P43034 410 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 E2F4Q16254 413 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 AFAP1L1Q8TED9 768 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 FAM204AQ9H8W3 233 aa12.08□□□□□ -0.48
THUMPD3-201ENST00000345094 LIG3P49916 1009 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 SRGAP1Q7Z6B7 1085 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 DEPDC5O75140 1603 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 GOLGA6L10A6NI86 522 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 TSPY2A6NKD2 308 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 IKBKBO14920 756 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 IGHMBP2P38935 993 aaKnown RBP12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 IRX3P78415 501 aaPredicted RBP12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 GSPT2Q8IYD1 628 aaKnown RBP12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 ANKRD13CQ8N6S4 541 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 DCAF5Q96JK2 942 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 C19orf44Q9H6X5 657 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 FHOD1Q9Y613 1164 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 A2ML1A8K2U0 1454 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 HECW2Q9P2P5 1572 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 IRS4O14654 1257 aaPredicted RBP12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 PRKAB2O43741 272 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 CDC27P30260 824 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 PDE4BQ07343 736 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 SDR42E1Q8WUS8 393 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 KRT23Q9C075 422 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 STX8Q9UNK0 236 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 REREQ9P2R6 1566 aa12.07□□□□□ -0.48
THUMPD3-201ENST00000345094 INO80Q9ULG1 1556 aaPredicted RBP12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 EBAG9O00559 213 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 SRGAP2O75044 1071 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 CYP2C19P33261 490 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 SND1Q7KZF4 910 aaKnown RBP eCLIP12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 CDC23Q9UJX2 597 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 KIDINS220Q9ULH0 1771 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 VWDEQ8N2E2 1590 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 KRT18P05783 430 aaKnown RBP12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 PHKA1P46020 1223 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 CDR1P51861 262 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 TAX1BP1Q86VP1 789 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 CCDC42Q96M95 316 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 RNF41Q9H4P4 317 aaPredicted RBP12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 USO1O60763 962 aaKnown RBP12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 KRT2P35908 639 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 GRIN1Q05586 938 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 KIF5AQ12840 1032 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 AMOTL1Q8IY63 956 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 MROH7-TTC4A0A0A0MT08 1334 aa12.06□□□□□ -0.48
THUMPD3-201ENST00000345094 KRT86O43790 486 aa12.05□□□□□ -0.48
THUMPD3-201ENST00000345094 N4BP1O75113 896 aaKnown RBP12.05□□□□□ -0.48
THUMPD3-201ENST00000345094 PHKG2P15735 406 aa12.05□□□□□ -0.48
THUMPD3-201ENST00000345094 ACTN2P35609 894 aa12.05□□□□□ -0.48
THUMPD3-201ENST00000345094 ATP1A2P50993 1020 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms