RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TSPY3P0CV98 308 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 TSPY8P0CW00 308 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 CERS3Q8IU89 383 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 KLHL7Q8IXQ5 586 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 OR8K1Q8NGG5 319 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 STX8Q9UNK0 236 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 ATP2A2P16615 1042 aaKnown RBP20.17■□□□□ 0.82
SMC4-201ENST00000344722 MIPOL1Q8TD10 442 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 NELFBQ8WX92 580 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 FAN1Q9Y2M0 1017 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 DTNBO60941 627 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 RNASE9P60153 205 aaKnown RBP20.17■□□□□ 0.82
SMC4-201ENST00000344722 KRT71Q3SY84 523 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 TMEM87AQ8NBN3 555 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 KIF3CO14782 793 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 GKAP1Q5VSY0 366 aaPredicted RBP20.17■□□□□ 0.82
SMC4-201ENST00000344722 ZNF274Q96GC6 653 aaPredicted RBP20.17■□□□□ 0.82
SMC4-201ENST00000344722 OSBPL3Q9H4L5 887 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 MYO1AQ9UBC5 1043 aa20.17■□□□□ 0.82
SMC4-201ENST00000344722 A0A1W2PQ27 194 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 A0A1W2PQ64 194 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 A0A1W2PQD8 194 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 LUC7L3O95232 432 aaKnown RBP20.16■□□□□ 0.82
SMC4-201ENST00000344722 ASIC2Q16515 512 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 ANKLE2Q86XL3 938 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 CCDC110Q8TBZ0 833 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.16■□□□□ 0.82
SMC4-201ENST00000344722 HYOU1Q9Y4L1 999 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 KDM5CP41229 1560 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 PFKFB2O60825 505 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 SF3B2Q13435 895 aaKnown RBP20.16■□□□□ 0.82
SMC4-201ENST00000344722 IFIH1Q9BYX4 1025 aaKnown RBP20.16■□□□□ 0.82
SMC4-201ENST00000344722 URB2Q14146 1524 aaKnown RBP20.16■□□□□ 0.82
SMC4-201ENST00000344722 FERMT1Q9BQL6 677 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 NOL3O60936 208 aaKnown RBP20.16■□□□□ 0.82
SMC4-201ENST00000344722 RNF40O75150 1001 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 BICDL1Q6ZP65 573 aa20.16■□□□□ 0.82
SMC4-201ENST00000344722 WDR62O43379 1518 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 CEP104O60308 925 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 SH3BGRP55822 239 aaPredicted RBP20.15■□□□□ 0.82
SMC4-201ENST00000344722 ARHGAP24Q8N264 748 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 RAB3IPQ96QF0 476 aaPredicted RBP20.15■□□□□ 0.82
SMC4-201ENST00000344722 PCDHA7Q9UN72 937 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 MYO1CO00159 1063 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 MAGEA9P43362 315 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 NBPF14Q5TI25 921 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 HOXB7P09629 217 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 CTNNA1P35221 906 aaKnown RBP20.15■□□□□ 0.82
SMC4-201ENST00000344722 FBXO18Q8NFZ0 1043 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 PLIN2Q99541 437 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 FANCLQ9NW38 375 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 IKBKBO14920 756 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 SETSIPP0DME0 302 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 ATP1A2P50993 1020 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 RPS6KA1Q15418 735 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 ICE2Q659A1 982 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 KBTBD3Q8NAB2 608 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 DSCC1Q9BVC3 393 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 SERTAD1Q9UHV2 236 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 HDAC9Q9UKV0 1011 aa20.15■□□□□ 0.82
SMC4-201ENST00000344722 TRAF5O00463 557 aa20.14■□□□□ 0.82
SMC4-201ENST00000344722 GNA11P29992 359 aa20.14■□□□□ 0.82
SMC4-201ENST00000344722 NUCKS1Q9H1E3 243 aaKnown RBP20.14■□□□□ 0.82
SMC4-201ENST00000344722 FANCAO15360 1455 aa20.14■□□□□ 0.82
SMC4-201ENST00000344722 RPL13P26373 211 aaKnown RBP20.14■□□□□ 0.81
SMC4-201ENST00000344722 PTH1RQ03431 593 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 PARD6BQ9BYG5 372 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 SPATS2LQ9NUQ6 558 aaKnown RBP20.14■□□□□ 0.81
SMC4-201ENST00000344722 NSFL1CQ9UNZ2 370 aaKnown RBP20.14■□□□□ 0.81
SMC4-201ENST00000344722 MCTP2Q6DN12 878 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 CCDC84Q86UT8 332 aaPredicted RBP20.14■□□□□ 0.81
SMC4-201ENST00000344722 RGS22Q8NE09 1264 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 MCUR1Q96AQ8 359 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 VCX3BQ9H321 246 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 MAPK8IP1Q9UQF2 711 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 MAGEB6P1A0A0J9YX57 407 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 RASSF2P50749 326 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 CLEC17AQ6ZS10 378 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 SYCE1Q8N0S2 351 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 PSMB7Q99436 277 aa20.14■□□□□ 0.81
SMC4-201ENST00000344722 MORC2Q9Y6X9 1032 aaPredicted RBP20.14■□□□□ 0.81
SMC4-201ENST00000344722 CFAP57Q96MR6 1250 aa20.13■□□□□ 0.81
SMC4-201ENST00000344722 TCP1P17987 556 aaKnown RBP20.13■□□□□ 0.81
SMC4-201ENST00000344722 ANKIB1Q9P2G1 1089 aa20.13■□□□□ 0.81
SMC4-201ENST00000344722 B4E1Z4 1266 aa20.13■□□□□ 0.81
SMC4-201ENST00000344722 TTC38Q5R3I4 469 aa20.13■□□□□ 0.81
SMC4-201ENST00000344722 CCDC63Q8NA47 563 aa20.13■□□□□ 0.81
SMC4-201ENST00000344722 ARHGEF2Q92974 986 aaKnown RBP20.13■□□□□ 0.81
SMC4-201ENST00000344722 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
SMC4-201ENST00000344722 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
SMC4-201ENST00000344722 FBXO31Q5XUX0 539 aaPredicted RBP20.13■□□□□ 0.81
SMC4-201ENST00000344722 C11orf57Q6ZUT1 292 aaPredicted RBP20.13■□□□□ 0.81
SMC4-201ENST00000344722 LSG1Q9H089 658 aaKnown RBP20.13■□□□□ 0.81
SMC4-201ENST00000344722 STAP2Q9UGK3 403 aa20.13■□□□□ 0.81
SMC4-201ENST00000344722 HIP1RO75146 1068 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 GSTO1P78417 241 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 CCDC65Q8IXS2 484 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 UBL4BQ8N7F7 174 aa20.12■□□□□ 0.81
SMC4-201ENST00000344722 PTPRTO14522 1441 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms