RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 ALDH1L1O75891 902 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CCDC129Q6ZRS4 1044 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 VPS52Q8N1B4 723 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 TPX2Q9ULW0 747 aaKnown RBP5.87□□□□□ -1.47
KRR1-201ENST00000229214 FANCAO15360 1455 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 IFIT5Q13325 482 aaKnown RBP5.87□□□□□ -1.47
KRR1-201ENST00000229214 IQUBQ8NA54 791 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CDHR1Q96JP9 859 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CTAGE15A4D2H0 777 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 LRRIQ3A6PVS8 624 aaPredicted RBP5.87□□□□□ -1.47
KRR1-201ENST00000229214 KRT8P05787 483 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CTAGE8P0CG41 777 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 ABL2P42684 1182 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 TTC39AQ5SRH9 613 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 HDXQ7Z353 690 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CTAGE6Q86UF2 777 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CTAGE4Q8IX94 777 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 HELBQ8NG08 1087 aaPredicted RBP5.87□□□□□ -1.47
KRR1-201ENST00000229214 CTTNBP2NLQ9P2B4 639 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 SLC12A7Q9Y666 1083 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 PTPRKQ15262 1439 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 MINK1Q8N4C8 1332 aaPredicted RBP5.87□□□□□ -1.47
KRR1-201ENST00000229214 TRIM60Q495X7 471 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CNNM4Q6P4Q7 775 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 PPP1R9AQ9ULJ8 1098 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 PIK3C2GO75747 1445 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 SCAF11Q99590 1463 aaKnown RBP5.87□□□□□ -1.47
KRR1-201ENST00000229214 CCDC15Q0P6D6 951 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 BRIP1Q9BX63 1249 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 ANKRD2Q9GZV1 360 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 CD2APQ9Y5K6 639 aa5.87□□□□□ -1.47
KRR1-201ENST00000229214 RAPGEF6Q8TEU7 1601 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 CCT6BQ92526 530 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 SNX19Q92543 992 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 PIGBOS1A0A0B4J2F0 54 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 GOLGA8BA8MQT2 603 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 SMIM24O75264 130 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 ZNF444Q8N0Y2 327 aaPredicted RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 MAK16Q9BXY0 300 aaKnown RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 LAMC1P11047 1609 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 ADGRL1O94910 1474 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 SMAPO00193 183 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 ARHGAP6O43182 974 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 SFSWAPQ12872 951 aaKnown RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 CYTH1Q15438 398 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 ENOX1Q8TC92 643 aaKnown RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.86□□□□□ -1.47
KRR1-201ENST00000229214 NUP88Q99567 741 aaPredicted RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 RIMS2Q9UQ26 1411 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 CITO14578 2027 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 COPB2P35606 906 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 CEP85LQ5SZL2 805 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 CATSPER1Q8NEC5 780 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 TMEM247A6NEH6 219 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 SURF6O75683 361 aaKnown RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 ERCC3P19447 782 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 MKNK2Q9HBH9 465 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 ABCC5O15440 1437 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 ST20-MTHFSA0A0A6YYL1 179 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 EIF3BP55884 814 aaKnown RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 AP1G2O75843 785 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 CDC42EP1Q00587 391 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 FKBP4Q02790 459 aaKnown RBP eCLIP5.86□□□□□ -1.47
KRR1-201ENST00000229214 NEDD9Q14511 834 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 NDUFAF2Q8N183 169 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 PPP4R1Q8TF05 950 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 BCL2L12Q9HB09 334 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 MYH6P13533 1939 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 LMNAP02545 664 aaKnown RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 PDCD7Q8N8D1 485 aaKnown RBP5.86□□□□□ -1.47
KRR1-201ENST00000229214 MTA3Q9BTC8 594 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 LRP2BPQ9P2M1 347 aa5.86□□□□□ -1.47
KRR1-201ENST00000229214 CCDC169A6NNP5 214 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 CA4P22748 312 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 USTQ9Y2C2 406 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 MYH3P11055 1940 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 GNAT3A8MTJ3 354 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 ERCC5P28715 1186 aaPredicted RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 SERPINB10P48595 397 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 MRPS9P82933 396 aaKnown RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 PURAQ00577 322 aaKnown RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 CNNM3Q8NE01 707 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 SUPT20HQ8NEM7 779 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 NCOA7Q8NI08 942 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 THOC1Q96FV9 657 aaKnown RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 BICD1Q96G01 975 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 ATP6V0A2Q9Y487 856 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 USP19O94966 1318 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 RPAP1Q9BWH6 1393 aaPredicted RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 PALM3A6NDB9 673 aaPredicted RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 ANXA13P27216 316 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 WDR75Q8IWA0 830 aaKnown RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 EXOC5O00471 708 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 ZNF213O14771 459 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 AKR1B10O60218 316 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 SERPINB4P48594 390 aa5.85□□□□□ -1.47
KRR1-201ENST00000229214 THOC7Q6I9Y2 204 aaKnown RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 ELOA2Q8IYF1 753 aaPredicted RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 CRACR2BQ8N4Y2 399 aaPredicted RBP5.85□□□□□ -1.47
KRR1-201ENST00000229214 GRPEL1Q9HAV7 217 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms