RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Efcc1Q9JJF6 558 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Irgm2A0A140LIF8 407 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Gm10093D3YYI8 482 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Cyp2d34L7N463 504 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Hdac1O09106 482 aaKnown RBP22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 L1camP11627 1260 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Tll1Q62381 1013 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 EngaseQ8BX80 734 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Phf20l1Q8CCJ9 1013 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Il21rQ9JHX3 529 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Tmod2Q9JKK7 351 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Thsd7bQ6P4U0 1607 aa22.21■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Tcof1O08784 1320 aaKnown RBP22.2■■□□□ 1.15
Scn1b-203ENSMUST00000211945 Gm36210A0A1B0GS00 229 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 A0A1W2P6Q8 802 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Gm9048A0A1W2P7H4 802 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 A0A1W2P7Z8 802 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Gm9046A0A1W2P855 802 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Slc44a1Q6X893 653 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Phf20Q8BLG0 1010 aaKnown RBP22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 C8aQ8K182 587 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Ppp1r11Q8K1L5 131 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Med23Q80YQ2 1367 aa22.2■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Slc1a4O35874 532 aa22.19■■□□□ 1.14
Scn1b-203ENSMUST00000211945 CtshP49935 333 aa22.19■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Kif20aP97329 887 aa22.19■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Ncf1Q09014 390 aa22.19■■□□□ 1.14
Scn1b-203ENSMUST00000211945 GrapQ9CX99 217 aa22.19■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Znf287Q9EQB9 759 aa22.19■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Exosc10P56960 887 aaKnown RBP22.18■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Ccdc158Q8CDI6 1109 aa22.18■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Psma5Q9Z2U1 241 aaKnown RBP22.18■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Cxcl9P18340 126 aa22.17■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Gpsm2Q8VDU0 679 aa22.17■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Cdca7lQ922M5 438 aa22.17■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Lipo1J3QME6 396 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Znf326O88291 580 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Slc10a4Q3UEZ8 437 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 D630036H23RikQ3UQD6 204 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Senp5Q6NXL6 749 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Spata21Q8BHW6 681 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Gm29094F6Q785 221 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Sema3eP70275 775 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Stxbp2Q64324 593 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 QarsQ8BML9 775 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 OplahQ8K010 1288 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Apbb1ipQ8R5A3 670 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Cdca7Q9D0M2 382 aa22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 LlphQ9D945 130 aaKnown RBP22.16■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Usp31E9Q6Y8 1344 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Mmp20P57748 482 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Eya3P97480 510 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Rc3h1Q4VGL6 1130 aaKnown RBP22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Brip1Q5SXJ3 1174 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Fam170aQ66LM6 333 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Fam196bQ6GQV1 535 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Krt74Q6IFZ9 495 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Gm21985Q6P6P5 1106 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Gpr108Q91WD0 569 aa22.15■■□□□ 1.14
Scn1b-203ENSMUST00000211945 Ftl1P29391 183 aa22.14■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Zfp953Q3UPV7 304 aa22.14■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ints3Q7TPD0 1041 aaKnown RBP22.14■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Rps6kb1Q8BSK8 525 aa22.14■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Odf2lQ9D478 642 aa22.14■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Sil1Q9EPK6 465 aa22.14■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Plagl1Q9JLQ4 704 aa22.14■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Nlgn2Q69ZK9 836 aa22.13■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ddx55Q6ZPL9 600 aaKnown RBP22.13■■□□□ 1.13
Scn1b-203ENSMUST00000211945 TicrrQ8BQ33 1889 aa22.13■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Palm3A2TJV2 734 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Rabep1O35551 862 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Mybl2P48972 704 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Gjb2Q00977 226 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Qrich1Q3UA37 777 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Pip5kl1Q6U7H8 395 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Tti2Q8BGV4 512 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Slx4ipQ9D7Y9 413 aa22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 SmapQ9R0P4 181 aaKnown RBP22.12■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ptpn12P35831 775 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Mtx1P47802 317 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Dpp8Q80YA7 892 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ncaph2Q8BSP2 607 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Acot3Q9QYR7 432 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Zmym2Q9CU65 1376 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Sec23aQ01405 765 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 1700010I14RikQ7TPG0 532 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Rbm28Q8CGC6 750 aaKnown RBP22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 AnlnQ8K298 1121 aaKnown RBP22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Inpp5bQ8K337 993 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Nup133Q8R0G9 1155 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Q9D9S1 216 aa22.11■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Zscan18E9PUD6 809 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Sema3fO88632 785 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Pde6aP27664 859 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ttll12Q3UDE2 639 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Ankrd13cQ3UX43 541 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 RubcnQ80U62 956 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Paf1Q8K2T8 535 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Trex1Q91XB0 314 aa22.1■■□□□ 1.13
Scn1b-203ENSMUST00000211945 Akap8Q9DBR0 687 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 22,080 RNA–protein pairs in 67.1 ms