RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Igkv4-78A0A0A6YYE5 119 aa18.19■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Ly6g6dQ9Z1Q3 135 aa18.19■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Ighv1-4A0A075B5T4 117 aa18.18■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 P01756 117 aa18.18■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 P01757 117 aa18.18■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Gm9513B3GLJ6 99 aa18.18■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Trbv14A0A140T8L9 115 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Foxc1Q61572 553 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Timm17aQ9Z0V8 171 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Gm20726G3UX18 150 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Dad1P61804 113 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Atp5g3P56384 141 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Atp5g1Q9CR84 136 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 BC048562Q80ZQ7 204 aa18.17■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Lst1O08843 95 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Ang4Q3TMQ6 144 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 P06330 118 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Heatr1G3X9B1 2143 aaKnown RBP18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Smim10l1A0A087WNQ7 89 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Igkv4-79A0A075B5L8 119 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Tm2d1Q99MB3 208 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 RlfA2A7F4 1918 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 7420426K07RikQ3UX66 186 aa18.16■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Glrp1E9Q9S8 174 aa18.15■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Chchd5Q9CQP3 110 aa18.15■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Tmem52Q9D702 196 aa18.15■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Ank3G5E8K5 1961 aa18.15■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Gp9O88186 177 aa18.15■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Rp1P56716 2095 aa18.15■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 F8Q06194 2319 aa18.15■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Ighv5-8A0A075B676 92 aa18.14■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Igkv4-57A0A0A6YYE7 117 aa18.14■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Spink8Q09TK9 105 aa18.14■□□□□ 0.5
Sh3rf1-201ENSMUST00000034060 Cela2aP05208 271 aa18.14■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Acyp1P56376 99 aa18.14■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Gm12253Q5NC48 229 aa18.14■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Defb47Q30KN1 79 aa18.14■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Tmem210Q9D2F0 147 aa18.14■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 PemtQ61907 199 aa18.14■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Cacna1aP97445 2368 aa18.14■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 P0C913 63 aa18.13■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Foxi2Q3I5G5 311 aa18.13■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Nlrc5C3VPR6 1915 aa18.13■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Defb29Q8BGW9 78 aa18.13■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 1500011B03RikQ3TTH7 73 aa18.12■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 GrnP28798 589 aaKnown RBP18.12■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Plxnd1Q3UH93 1925 aa18.12■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Atg2aQ6P4T0 1914 aa18.12■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Rnf114Q9ET26 229 aa18.12■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Cryba4Q9JJV0 196 aa18.12■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 NpyP57774 97 aa18.12■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Vsig4F6TUL9 280 aa18.11■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 3110082J24RikF6Z6Z2 108 aa18.11■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 GfyJ3KML8 504 aa18.11■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 NpbQ8K4P1 119 aa18.11■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Gm8251F6VUT6 1994 aa18.11■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Fancd2osQ9D4K4 178 aa18.11■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Reg3gO09049 174 aa18.1■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Igkv4-58A0A0G2JGI6 119 aa18.1■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Igkv8-34A0A0G2JDU0 121 aa18.1■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Mrpl52Q9D0Y8 121 aa18.1■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 3110021N24RikJ3QMN2 152 aa18.1■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Gata1P17679 413 aa18.1■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Gm15093A2BI72 449 aa18.09■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Gm15085Q62012 449 aa18.09■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Zc2hc1aQ8BJH1 324 aa18.09■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 MpdzQ8VBX6 2055 aa18.09■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 9930022D16RikQ8BG27 128 aa18.09■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Cdpf1Q8R3A2 119 aa18.09■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Edn3P48299 214 aa18.08■□□□□ 0.49
Sh3rf1-201ENSMUST00000034060 Trav11A0A0B4J1J9 114 aa18.08■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Gm15097E9QA14 449 aa18.08■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Sp5Q9JHX2 398 aa18.08■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 P01750 117 aa18.07■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Lyrm9Q3UN90 78 aa18.07■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Abca7Q91V24 2159 aa18.07■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Zdbf2Q5SS00 2493 aaKnown RBP18.06■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Nxph4G3X9N5 304 aa18.06■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Gm5468Q8C3D3 155 aa18.06■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Gm9970F6ZED4 185 aa18.05■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Mlst8Q9DCJ1 326 aa18.05■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Gm20730A0A075B5J6 119 aa18.05■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Ighv1-58A0A075B5W9 117 aa18.04■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Ighv1-52A0A0A6YXC3 117 aa18.04■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 C920008G01RikA0A0B4J1N1 112 aa18.04■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Smim20D3Z7Q2 69 aa18.04■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Gm17455G3UW87 128 aa18.04■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Ndufa1O35683 70 aa18.04■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 AngP21570 145 aa18.04■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Ndufs7Q9DC70 224 aa18.03■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Ighv2-6A0A075B6A7 116 aa18.03■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 P04943 107 aa18.03■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Nup210lQ9D2F7 1881 aa18.02■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 MylkQ6PDN3 1941 aaKnown RBP18.02■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Brk1Q91VR8 75 aa18.02■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Ints1Q6P4S8 2195 aa18.02■□□□□ 0.48
Sh3rf1-201ENSMUST00000034060 Trbv16A0A0B4J1H3 115 aa18.01■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Igkv4-74A0A0B4J1I3 119 aa18.01■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Gm37988J3QM41 62 aa18.01■□□□□ 0.47
Sh3rf1-201ENSMUST00000034060 Defb26Q30KN7 186 aa18.01■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 97 ms