RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 PRO2289Q9P1D8 64 aa4.6□□□□□ -1.67
HNRNPU-221ENST00000639824 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
HNRNPU-221ENST00000639824 MT1XP80297 61 aa4.57□□□□□ -1.68
HNRNPU-221ENST00000639824 LUZP6Q538Z0 58 aa4.57□□□□□ -1.68
HNRNPU-221ENST00000639824 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
HNRNPU-221ENST00000639824 LCE3AQ5TA76 89 aa4.55□□□□□ -1.68
HNRNPU-221ENST00000639824 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
HNRNPU-221ENST00000639824 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
HNRNPU-221ENST00000639824 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
HNRNPU-221ENST00000639824 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
HNRNPU-221ENST00000639824 KRTAP19-5Q3LI72 72 aa4.21□□□□□ -1.74
HNRNPU-221ENST00000639824 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
HNRNPU-221ENST00000639824 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
HNRNPU-221ENST00000639824 USH2AO75445 5202 aa4.14□□□□□ -1.75
HNRNPU-221ENST00000639824 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
HNRNPU-221ENST00000639824 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
HNRNPU-221ENST00000639824 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
HNRNPU-221ENST00000639824 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
HNRNPU-221ENST00000639824 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
HNRNPU-221ENST00000639824 MT1EP04732 61 aa3.99□□□□□ -1.77
HNRNPU-221ENST00000639824 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
HNRNPU-221ENST00000639824 MT1LQ93083 61 aa3.97□□□□□ -1.77
HNRNPU-221ENST00000639824 INE1O15225 51 aa3.9□□□□□ -1.79
HNRNPU-221ENST00000639824 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
HNRNPU-221ENST00000639824 KMT2DO14686 5537 aa3.89□□□□□ -1.79
HNRNPU-221ENST00000639824 MT1GP13640 62 aa3.81□□□□□ -1.8
HNRNPU-221ENST00000639824 KRTAP4-4Q9BYR3 166 aa3.8□□□□□ -1.8
HNRNPU-221ENST00000639824 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
HNRNPU-221ENST00000639824 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
HNRNPU-221ENST00000639824 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
HNRNPU-221ENST00000639824 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
HNRNPU-221ENST00000639824 MT1MQ8N339 61 aa3.74□□□□□ -1.81
HNRNPU-221ENST00000639824 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
HNRNPU-221ENST00000639824 SPRR2FQ96RM1 72 aa3.69□□□□□ -1.82
HNRNPU-221ENST00000639824 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.83
HNRNPU-221ENST00000639824 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
HNRNPU-221ENST00000639824 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
HNRNPU-221ENST00000639824 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.84
HNRNPU-221ENST00000639824 MUC12Q9UKN1 5478 aa3.51□□□□□ -1.85
HNRNPU-221ENST00000639824 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
HNRNPU-221ENST00000639824 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
HNRNPU-221ENST00000639824 SPRR2EP22531 72 aa3.43□□□□□ -1.86
HNRNPU-221ENST00000639824 SPRR2BP35325 72 aa3.43□□□□□ -1.86
HNRNPU-221ENST00000639824 SPRR2AP35326 72 aa3.43□□□□□ -1.86
HNRNPU-221ENST00000639824 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
HNRNPU-221ENST00000639824 MT1AP04731 61 aa3.39□□□□□ -1.87
HNRNPU-221ENST00000639824 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
HNRNPU-221ENST00000639824 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.88
HNRNPU-221ENST00000639824 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
HNRNPU-221ENST00000639824 SPRR2DP22532 72 aa3.3□□□□□ -1.88
HNRNPU-221ENST00000639824 DSTQ03001 7570 aaKnown RBP3.26□□□□□ -1.89
HNRNPU-221ENST00000639824 KRTAP12-4P60329 112 aa3.25□□□□□ -1.89
HNRNPU-221ENST00000639824 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
HNRNPU-221ENST00000639824 MDN1Q9NU22 5596 aa3.24□□□□□ -1.89
HNRNPU-221ENST00000639824 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
HNRNPU-221ENST00000639824 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.92
HNRNPU-221ENST00000639824 LCE1CQ5T751 118 aa3.03□□□□□ -1.93
HNRNPU-221ENST00000639824 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.93
HNRNPU-221ENST00000639824 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
HNRNPU-221ENST00000639824 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
HNRNPU-221ENST00000639824 NEBP20929 6669 aa2.91□□□□□ -1.94
HNRNPU-221ENST00000639824 PRM1P04553 51 aa2.84□□□□□ -1.96
HNRNPU-221ENST00000639824 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
HNRNPU-221ENST00000639824 MT4P47944 62 aa2.82□□□□□ -1.96
HNRNPU-221ENST00000639824 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
HNRNPU-221ENST00000639824 HMCN1Q96RW7 5635 aa2.69□□□□□ -1.98
HNRNPU-221ENST00000639824 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
HNRNPU-221ENST00000639824 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
HNRNPU-221ENST00000639824 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
HNRNPU-221ENST00000639824 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
HNRNPU-221ENST00000639824 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
HNRNPU-221ENST00000639824 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
HNRNPU-221ENST00000639824 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
HNRNPU-221ENST00000639824 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
HNRNPU-221ENST00000639824 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
HNRNPU-221ENST00000639824 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
HNRNPU-221ENST00000639824 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
HNRNPU-221ENST00000639824 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 101.1 ms