RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
CACNA1A-253ENST00000637927 MT1EP04732 61 aa5.26□□□□□ -1.57
CACNA1A-253ENST00000637927 LRP2P98164 4655 aa5.24□□□□□ -1.57
CACNA1A-253ENST00000637927 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.57
CACNA1A-253ENST00000637927 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
CACNA1A-253ENST00000637927 MT3P25713 68 aa5.17□□□□□ -1.58
CACNA1A-253ENST00000637927 KRTAP19-6Q3LI70 58 aa5.16□□□□□ -1.58
CACNA1A-253ENST00000637927 MT1MQ8N339 61 aa5.15□□□□□ -1.58
CACNA1A-253ENST00000637927 MUC17Q685J3 4493 aa5.15□□□□□ -1.59
CACNA1A-253ENST00000637927 EPPK1P58107 5090 aaKnown RBP5.08□□□□□ -1.6
CACNA1A-253ENST00000637927 KRTAP20-1Q3LI63 56 aa5.04□□□□□ -1.6
CACNA1A-253ENST00000637927 LCE4AQ5TA78 99 aa5.03□□□□□ -1.6
CACNA1A-253ENST00000637927 KRTAP19-2Q3LHN2 52 aa4.97□□□□□ -1.61
CACNA1A-253ENST00000637927 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
CACNA1A-253ENST00000637927 HERC1Q15751 4861 aa4.94□□□□□ -1.62
CACNA1A-253ENST00000637927 PCLOQ9Y6V0 5065 aa4.93□□□□□ -1.62
CACNA1A-253ENST00000637927 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
CACNA1A-253ENST00000637927 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
CACNA1A-253ENST00000637927 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
CACNA1A-253ENST00000637927 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
CACNA1A-253ENST00000637927 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
CACNA1A-253ENST00000637927 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
CACNA1A-253ENST00000637927 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
CACNA1A-253ENST00000637927 MT1AP04731 61 aa4.66□□□□□ -1.66
CACNA1A-253ENST00000637927 KRTAP6-1Q3LI64 71 aa4.61□□□□□ -1.67
CACNA1A-253ENST00000637927 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
CACNA1A-253ENST00000637927 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
CACNA1A-253ENST00000637927 MUC2Q02817 5179 aa4.51□□□□□ -1.69
CACNA1A-253ENST00000637927 UBR4Q5T4S7 5183 aa4.51□□□□□ -1.69
CACNA1A-253ENST00000637927 RNF213Q63HN8 5207 aa4.45□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
CACNA1A-253ENST00000637927 OBSCNQ5VST9 7968 aa4.41□□□□□ -1.7
CACNA1A-253ENST00000637927 KRTAP6-3Q3LI67 103 aa4.37□□□□□ -1.71
CACNA1A-253ENST00000637927 KRTAP9-6A8MVA2 160 aa4.35□□□□□ -1.71
CACNA1A-253ENST00000637927 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
CACNA1A-253ENST00000637927 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
CACNA1A-253ENST00000637927 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
CACNA1A-253ENST00000637927 KRTAP4-4Q9BYR3 166 aa4.27□□□□□ -1.73
CACNA1A-253ENST00000637927 KRTAP4-6Q9BYQ5 205 aa4.26□□□□□ -1.73
CACNA1A-253ENST00000637927 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
CACNA1A-253ENST00000637927 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
CACNA1A-253ENST00000637927 DSTQ03001 7570 aaKnown RBP4.05□□□□□ -1.76
CACNA1A-253ENST00000637927 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
CACNA1A-253ENST00000637927 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
CACNA1A-253ENST00000637927 KMT2DO14686 5537 aa3.93□□□□□ -1.78
CACNA1A-253ENST00000637927 USH2AO75445 5202 aa3.84□□□□□ -1.79
CACNA1A-253ENST00000637927 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
CACNA1A-253ENST00000637927 NEBP20929 6669 aa3.57□□□□□ -1.84
CACNA1A-253ENST00000637927 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
CACNA1A-253ENST00000637927 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
CACNA1A-253ENST00000637927 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
CACNA1A-253ENST00000637927 MDN1Q9NU22 5596 aa3.3□□□□□ -1.88
CACNA1A-253ENST00000637927 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
CACNA1A-253ENST00000637927 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
CACNA1A-253ENST00000637927 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
CACNA1A-253ENST00000637927 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CACNA1A-253ENST00000637927 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
CACNA1A-253ENST00000637927 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
CACNA1A-253ENST00000637927 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
CACNA1A-253ENST00000637927 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
CACNA1A-253ENST00000637927 KRTAP5-2Q701N4 177 aa2.52□□□□□ -2.01
CACNA1A-253ENST00000637927 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
CACNA1A-253ENST00000637927 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
CACNA1A-253ENST00000637927 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CACNA1A-253ENST00000637927 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
CACNA1A-253ENST00000637927 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
CACNA1A-253ENST00000637927 KRTAP5-11Q6L8G4 156 aa2.08□□□□□ -2.08
CACNA1A-253ENST00000637927 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CACNA1A-253ENST00000637927 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.09
CACNA1A-253ENST00000637927 KRTAP5-7Q6L8G8 165 aa1.88□□□□□ -2.11
CACNA1A-253ENST00000637927 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.12
CACNA1A-253ENST00000637927 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms