RNA–Protein interactions for RNA: ENST00000637923.2

TCF4-288, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-288ENST00000637923 LOC100996750A0A140TA64 210 aa1.75□□□□□ -2.13
TCF4-288ENST00000637923 LCE5AQ5TCM9 118 aa1.75□□□□□ -2.13
TCF4-288ENST00000637923 MUC17Q685J3 4493 aa1.75□□□□□ -2.13
TCF4-288ENST00000637923 KRTAP4-3Q9BYR4 195 aa1.74□□□□□ -2.13
TCF4-288ENST00000637923 KRTAP4-9Q9BYQ8 210 aa1.73□□□□□ -2.13
TCF4-288ENST00000637923 HERC2O95714 4834 aa1.72□□□□□ -2.13
TCF4-288ENST00000637923 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
TCF4-288ENST00000637923 MT1LQ93083 61 aa1.69□□□□□ -2.14
TCF4-288ENST00000637923 KRTAP19-4Q3LI73 84 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 LRP2P98164 4655 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 MT1EP04732 61 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 LCE1AQ5T7P2 110 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 MT3P25713 68 aa1.68□□□□□ -2.14
TCF4-288ENST00000637923 KRTAP4-6Q9BYQ5 205 aa1.67□□□□□ -2.14
TCF4-288ENST00000637923 MT1MQ8N339 61 aa1.66□□□□□ -2.14
TCF4-288ENST00000637923 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
TCF4-288ENST00000637923 EPPK1P58107 5090 aaKnown RBP1.66□□□□□ -2.14
TCF4-288ENST00000637923 MDN1Q9NU22 5596 aa1.66□□□□□ -2.14
TCF4-288ENST00000637923 GPR98Q8WXG9 6306 aa1.64□□□□□ -2.15
TCF4-288ENST00000637923 PRM1P04553 51 aa1.63□□□□□ -2.15
TCF4-288ENST00000637923 LCE4AQ5TA78 99 aa1.63□□□□□ -2.15
TCF4-288ENST00000637923 KRTAP2-3P0C7H8 128 aa1.62□□□□□ -2.15
TCF4-288ENST00000637923 KRTAP2-4Q9BYR9 128 aa1.62□□□□□ -2.15
TCF4-288ENST00000637923 MUC2Q02817 5179 aa1.62□□□□□ -2.15
TCF4-288ENST00000637923 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.62□□□□□ -2.15
TCF4-288ENST00000637923 FSIP2Q5CZC0 6907 aa1.62□□□□□ -2.15
TCF4-288ENST00000637923 KRTAP19-2Q3LHN2 52 aa1.56□□□□□ -2.16
TCF4-288ENST00000637923 AHNAK2Q8IVF2 5795 aa1.56□□□□□ -2.16
TCF4-288ENST00000637923 KRTAP6-3Q3LI67 103 aa1.56□□□□□ -2.16
TCF4-288ENST00000637923 KRTAP2-2Q9BYT5 123 aa1.55□□□□□ -2.16
TCF4-288ENST00000637923 KRTAP2-1Q9BYU5 128 aa1.55□□□□□ -2.16
TCF4-288ENST00000637923 ABCA13Q86UQ4 5058 aa1.54□□□□□ -2.16
TCF4-288ENST00000637923 KRTAP6-2Q3LI66 62 aa1.53□□□□□ -2.16
TCF4-288ENST00000637923 MT1AP04731 61 aa1.49□□□□□ -2.17
TCF4-288ENST00000637923 UBR4Q5T4S7 5183 aa1.48□□□□□ -2.17
TCF4-288ENST00000637923 FAT4Q6V0I7 4981 aa1.48□□□□□ -2.17
TCF4-288ENST00000637923 KRTAP9-9Q9BYP9 154 aa1.47□□□□□ -2.17
TCF4-288ENST00000637923 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
TCF4-288ENST00000637923 KRTAP19-7Q3SYF9 63 aa1.45□□□□□ -2.18
TCF4-288ENST00000637923 KRTAP9-4Q9BYQ2 154 aa1.43□□□□□ -2.18
TCF4-288ENST00000637923 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
TCF4-288ENST00000637923 KRTAP5-2Q701N4 177 aa1.42□□□□□ -2.18
TCF4-288ENST00000637923 RNF213Q63HN8 5207 aa1.41□□□□□ -2.18
TCF4-288ENST00000637923 KRTAP20-2Q3LI61 65 aa1.38□□□□□ -2.19
TCF4-288ENST00000637923 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
TCF4-288ENST00000637923 FCGBPQ9Y6R7 5405 aaPredicted RBP1.37□□□□□ -2.19
TCF4-288ENST00000637923 KRTAP4-12Q9BQ66 201 aa1.35□□□□□ -2.19
TCF4-288ENST00000637923 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
TCF4-288ENST00000637923 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
TCF4-288ENST00000637923 MUC5ACP98088 5654 aa1.34□□□□□ -2.19
TCF4-288ENST00000637923 OBSCNQ5VST9 7968 aa1.34□□□□□ -2.2
TCF4-288ENST00000637923 KRTAP4-4Q9BYR3 166 aa1.33□□□□□ -2.2
TCF4-288ENST00000637923 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
TCF4-288ENST00000637923 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
TCF4-288ENST00000637923 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
TCF4-288ENST00000637923 USH2AO75445 5202 aa1.28□□□□□ -2.2
TCF4-288ENST00000637923 KRTAP9-6A8MVA2 160 aa1.28□□□□□ -2.21
TCF4-288ENST00000637923 MACF1Q9UPN3 7388 aaKnown RBP1.27□□□□□ -2.21
TCF4-288ENST00000637923 NEBP20929 6669 aa1.27□□□□□ -2.21
TCF4-288ENST00000637923 KRTAP4-11Q9BYQ6 195 aa1.26□□□□□ -2.21
TCF4-288ENST00000637923 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
TCF4-288ENST00000637923 KRTAP5-9P26371 169 aa1.15□□□□□ -2.22
TCF4-288ENST00000637923 KRTAP5-3Q6L8H2 238 aa1.13□□□□□ -2.23
TCF4-288ENST00000637923 KRTAP5-4Q6L8H1 288 aa1.11□□□□□ -2.23
TCF4-288ENST00000637923 KRTAP5-5Q701N2 237 aaPredicted RBP1.07□□□□□ -2.24
TCF4-288ENST00000637923 PHGR1C9JFL3 82 aa1.04□□□□□ -2.24
TCF4-288ENST00000637923 MUC19Q7Z5P9 8384 aa0.98□□□□□ -2.25
TCF4-288ENST00000637923 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
TCF4-288ENST00000637923 KRTAP5-11Q6L8G4 156 aa0.82□□□□□ -2.28
TCF4-288ENST00000637923 KRTAP5-1Q6L8H4 278 aa0.8□□□□□ -2.28
TCF4-288ENST00000637923 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
TCF4-288ENST00000637923 KRTAP5-7Q6L8G8 165 aa0.68□□□□□ -2.3
TCF4-288ENST00000637923 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
TCF4-288ENST00000637923 KRTAP21-2Q3LI59 83 aa0.64□□□□□ -2.31
TCF4-288ENST00000637923 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 144 ms