RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 KRTAP3-1Q9BYR8 98 aa4.34□□□□□ -1.71
CHD2-229ENST00000637789 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
CHD2-229ENST00000637789 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
CHD2-229ENST00000637789 ROMO1P60602 79 aa4.26□□□□□ -1.73
CHD2-229ENST00000637789 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
CHD2-229ENST00000637789 S4R3F8 94 aa4.24□□□□□ -1.73
CHD2-229ENST00000637789 KRTAP23-1A1A580 65 aa4.22□□□□□ -1.73
CHD2-229ENST00000637789 MT4P47944 62 aa4.19□□□□□ -1.74
CHD2-229ENST00000637789 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
CHD2-229ENST00000637789 M0QZ58 72 aa4.15□□□□□ -1.75
CHD2-229ENST00000637789 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
CHD2-229ENST00000637789 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
CHD2-229ENST00000637789 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
CHD2-229ENST00000637789 A0A0D9SG42 100 aa4.11□□□□□ -1.75
CHD2-229ENST00000637789 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
CHD2-229ENST00000637789 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
CHD2-229ENST00000637789 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
CHD2-229ENST00000637789 SPINT4Q6UDR6 99 aa4.06□□□□□ -1.76
CHD2-229ENST00000637789 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
CHD2-229ENST00000637789 P0C880 135 aa4.04□□□□□ -1.76
CHD2-229ENST00000637789 MT1XP80297 61 aa4.03□□□□□ -1.76
CHD2-229ENST00000637789 PRO2289Q9P1D8 64 aa4.03□□□□□ -1.76
CHD2-229ENST00000637789 KRTAP12-1P59990 96 aa4□□□□□ -1.77
CHD2-229ENST00000637789 R4GN34 69 aa3.95□□□□□ -1.78
CHD2-229ENST00000637789 MUC5ACP98088 5654 aa3.9□□□□□ -1.78
CHD2-229ENST00000637789 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
CHD2-229ENST00000637789 C10orf95Q9H7T3 257 aa3.9□□□□□ -1.79
CHD2-229ENST00000637789 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
CHD2-229ENST00000637789 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
CHD2-229ENST00000637789 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
CHD2-229ENST00000637789 KRTAP10-7P60409 375 aaPredicted RBP3.84□□□□□ -1.79
CHD2-229ENST00000637789 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
CHD2-229ENST00000637789 NDUFAF8A1L188 74 aa3.8□□□□□ -1.8
CHD2-229ENST00000637789 KRTAP10-12P60413 245 aa3.8□□□□□ -1.8
CHD2-229ENST00000637789 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
CHD2-229ENST00000637789 CAMK2N1Q7Z7J9 78 aa3.77□□□□□ -1.81
CHD2-229ENST00000637789 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
CHD2-229ENST00000637789 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
CHD2-229ENST00000637789 KRTAP20-2Q3LI61 65 aa3.7□□□□□ -1.82
CHD2-229ENST00000637789 TNP1P09430 55 aa3.68□□□□□ -1.82
CHD2-229ENST00000637789 MT1EP04732 61 aa3.62□□□□□ -1.83
CHD2-229ENST00000637789 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
CHD2-229ENST00000637789 KRTAP5-8O75690 187 aa3.58□□□□□ -1.84
CHD2-229ENST00000637789 MT1GP13640 62 aa3.56□□□□□ -1.84
CHD2-229ENST00000637789 MT1MQ8N339 61 aa3.52□□□□□ -1.85
CHD2-229ENST00000637789 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
CHD2-229ENST00000637789 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
CHD2-229ENST00000637789 KRTAP12-4P60329 112 aa3.4□□□□□ -1.87
CHD2-229ENST00000637789 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
CHD2-229ENST00000637789 MT1LQ93083 61 aa3.32□□□□□ -1.88
CHD2-229ENST00000637789 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
CHD2-229ENST00000637789 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
CHD2-229ENST00000637789 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
CHD2-229ENST00000637789 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
CHD2-229ENST00000637789 INE1O15225 51 aa3.27□□□□□ -1.89
CHD2-229ENST00000637789 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
CHD2-229ENST00000637789 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
CHD2-229ENST00000637789 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
CHD2-229ENST00000637789 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
CHD2-229ENST00000637789 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
CHD2-229ENST00000637789 MT3P25713 68 aa2.85□□□□□ -1.95
CHD2-229ENST00000637789 MT1AP04731 61 aa2.8□□□□□ -1.96
CHD2-229ENST00000637789 LCE1FQ5T754 118 aa2.78□□□□□ -1.96
CHD2-229ENST00000637789 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
CHD2-229ENST00000637789 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
CHD2-229ENST00000637789 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
CHD2-229ENST00000637789 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.74□□□□□ -1.97
CHD2-229ENST00000637789 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
CHD2-229ENST00000637789 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
CHD2-229ENST00000637789 LCE3EQ5T5B0 92 aa2.4□□□□□ -2.03
CHD2-229ENST00000637789 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
CHD2-229ENST00000637789 LCE3DQ9BYE3 92 aa2.38□□□□□ -2.03
CHD2-229ENST00000637789 KRTAP4-4Q9BYR3 166 aa2.27□□□□□ -2.05
CHD2-229ENST00000637789 PRM1P04553 51 aa2.19□□□□□ -2.06
CHD2-229ENST00000637789 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
CHD2-229ENST00000637789 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
CHD2-229ENST00000637789 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CHD2-229ENST00000637789 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 127.7 ms