RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 KRTAP19-2Q3LHN2 52 aa1.17□□□□□ -2.22
CD46-219ENST00000636114 KRTAP4-1Q9BYQ7 146 aa1.17□□□□□ -2.22
CD46-219ENST00000636114 EPPK1P58107 5090 aaKnown RBP1.15□□□□□ -2.23
CD46-219ENST00000636114 LPAP08519 4548 aa1.14□□□□□ -2.23
CD46-219ENST00000636114 LRP2P98164 4655 aa1.14□□□□□ -2.23
CD46-219ENST00000636114 M0R2T5 61 aa1.14□□□□□ -2.23
CD46-219ENST00000636114 MYCBP2O75592 4640 aa1.14□□□□□ -2.23
CD46-219ENST00000636114 PLAC4Q8WY50 150 aa1.13□□□□□ -2.23
CD46-219ENST00000636114 TNP1P09430 55 aa1.12□□□□□ -2.23
CD46-219ENST00000636114 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
CD46-219ENST00000636114 ABCA13Q86UQ4 5058 aa1.12□□□□□ -2.23
CD46-219ENST00000636114 MUC17Q685J3 4493 aa1.12□□□□□ -2.23
CD46-219ENST00000636114 C10orf95Q9H7T3 257 aa1.12□□□□□ -2.23
CD46-219ENST00000636114 MT1HP80294 61 aa1.11□□□□□ -2.23
CD46-219ENST00000636114 BIRC6Q9NR09 4857 aa1.11□□□□□ -2.23
CD46-219ENST00000636114 HERC2O95714 4834 aa1.1□□□□□ -2.23
CD46-219ENST00000636114 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
CD46-219ENST00000636114 PRO2289Q9P1D8 64 aa1.08□□□□□ -2.24
CD46-219ENST00000636114 MT2AP02795 61 aa1.07□□□□□ -2.24
CD46-219ENST00000636114 KRTAP5-7Q6L8G8 165 aa1.07□□□□□ -2.24
CD46-219ENST00000636114 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
CD46-219ENST00000636114 MT1FP04733 61 aa1.06□□□□□ -2.24
CD46-219ENST00000636114 HERC1Q15751 4861 aa1.04□□□□□ -2.24
CD46-219ENST00000636114 HMCN2Q8NDA2 5059 aa1.04□□□□□ -2.24
CD46-219ENST00000636114 PCLOQ9Y6V0 5065 aa1.03□□□□□ -2.24
CD46-219ENST00000636114 MT1BP07438 61 aa1.03□□□□□ -2.25
CD46-219ENST00000636114 FLGP20930 4061 aaPredicted RBP1.02□□□□□ -2.25
CD46-219ENST00000636114 MUC2Q02817 5179 aa1.02□□□□□ -2.25
CD46-219ENST00000636114 KRTAP8-1Q8IUC2 63 aa1.02□□□□□ -2.25
CD46-219ENST00000636114 SYNE2Q8WXH0 6885 aaKnown RBP1.02□□□□□ -2.25
CD46-219ENST00000636114 MT1XP80297 61 aa1.01□□□□□ -2.25
CD46-219ENST00000636114 KRTAP12-3P60328 96 aa0.99□□□□□ -2.25
CD46-219ENST00000636114 FAT4Q6V0I7 4981 aa0.98□□□□□ -2.25
CD46-219ENST00000636114 INE1O15225 51 aa0.96□□□□□ -2.26
CD46-219ENST00000636114 RNF213Q63HN8 5207 aa0.95□□□□□ -2.26
CD46-219ENST00000636114 UBR4Q5T4S7 5183 aa0.95□□□□□ -2.26
CD46-219ENST00000636114 MUC19Q7Z5P9 8384 aa0.94□□□□□ -2.26
CD46-219ENST00000636114 KRTAP6-3Q3LI67 103 aa0.94□□□□□ -2.26
CD46-219ENST00000636114 KRTAP19-6Q3LI70 58 aa0.94□□□□□ -2.26
CD46-219ENST00000636114 KRTAP12-4P60329 112 aa0.93□□□□□ -2.26
CD46-219ENST00000636114 CRCT1Q9UGL9 99 aa0.93□□□□□ -2.26
CD46-219ENST00000636114 KRTAP19-5Q3LI72 72 aa0.93□□□□□ -2.26
CD46-219ENST00000636114 KRTAP19-7Q3SYF9 63 aa0.9□□□□□ -2.26
CD46-219ENST00000636114 MT1EP04732 61 aa0.88□□□□□ -2.27
CD46-219ENST00000636114 MT1GP13640 62 aa0.88□□□□□ -2.27
CD46-219ENST00000636114 MT1LQ93083 61 aa0.88□□□□□ -2.27
CD46-219ENST00000636114 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
CD46-219ENST00000636114 KRTAP2-3P0C7H8 128 aa0.84□□□□□ -2.27
CD46-219ENST00000636114 KRTAP2-4Q9BYR9 128 aa0.84□□□□□ -2.27
CD46-219ENST00000636114 KRTAP2-1Q9BYU5 128 aa0.84□□□□□ -2.27
CD46-219ENST00000636114 KRTAP21-2Q3LI59 83 aa0.83□□□□□ -2.28
CD46-219ENST00000636114 MT1MQ8N339 61 aa0.83□□□□□ -2.28
CD46-219ENST00000636114 USH2AO75445 5202 aa0.83□□□□□ -2.28
CD46-219ENST00000636114 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
CD46-219ENST00000636114 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
CD46-219ENST00000636114 SSPOA2VEC9 5147 aa0.81□□□□□ -2.28
CD46-219ENST00000636114 KMT2DO14686 5537 aa0.79□□□□□ -2.28
CD46-219ENST00000636114 NEBP20929 6669 aa0.77□□□□□ -2.29
CD46-219ENST00000636114 MT1AP04731 61 aa0.77□□□□□ -2.29
CD46-219ENST00000636114 SPRR2EP22531 72 aa0.77□□□□□ -2.29
CD46-219ENST00000636114 SPRR2BP35325 72 aa0.77□□□□□ -2.29
CD46-219ENST00000636114 SPRR2AP35326 72 aa0.77□□□□□ -2.29
CD46-219ENST00000636114 FSIP2Q5CZC0 6907 aa0.76□□□□□ -2.29
CD46-219ENST00000636114 FCGBPQ9Y6R7 5405 aaPredicted RBP0.75□□□□□ -2.29
CD46-219ENST00000636114 SPRR2DP22532 72 aa0.74□□□□□ -2.29
CD46-219ENST00000636114 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
CD46-219ENST00000636114 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
CD46-219ENST00000636114 MUC12Q9UKN1 5478 aa0.7□□□□□ -2.3
CD46-219ENST00000636114 KRTAP6-2Q3LI66 62 aa0.66□□□□□ -2.3
CD46-219ENST00000636114 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
CD46-219ENST00000636114 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
CD46-219ENST00000636114 KRTAP20-2Q3LI61 65 aa0.63□□□□□ -2.31
CD46-219ENST00000636114 PRM1P04553 51 aa0.63□□□□□ -2.31
CD46-219ENST00000636114 MDN1Q9NU22 5596 aa0.63□□□□□ -2.31
CD46-219ENST00000636114 MT4P47944 62 aa0.62□□□□□ -2.31
CD46-219ENST00000636114 MUC16Q8WXI7 14507 aa0.45□□□□□ -2.34
CD46-219ENST00000636114 KRTAP21-1Q3LI58 79 aa0.41□□□□□ -2.34
CD46-219ENST00000636114 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms