RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
CDC42BPB-209ENST00000634889 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
CDC42BPB-209ENST00000634889 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
CDC42BPB-209ENST00000634889 CDC42SE1Q9NRR8 79 aa5.31□□□□□ -1.56
CDC42BPB-209ENST00000634889 MT1GP13640 62 aa5.3□□□□□ -1.56
CDC42BPB-209ENST00000634889 PP632Q6XCG6 107 aa5.27□□□□□ -1.57
CDC42BPB-209ENST00000634889 MT1LQ93083 61 aa5.27□□□□□ -1.57
CDC42BPB-209ENST00000634889 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
CDC42BPB-209ENST00000634889 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
CDC42BPB-209ENST00000634889 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
CDC42BPB-209ENST00000634889 MT1MQ8N339 61 aa5.19□□□□□ -1.58
CDC42BPB-209ENST00000634889 ROMO1P60602 79 aa5.18□□□□□ -1.58
CDC42BPB-209ENST00000634889 KRTAP19-4Q3LI73 84 aa5.03□□□□□ -1.6
CDC42BPB-209ENST00000634889 KRTAP4-3Q9BYR4 195 aa5.02□□□□□ -1.61
CDC42BPB-209ENST00000634889 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
CDC42BPB-209ENST00000634889 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
CDC42BPB-209ENST00000634889 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
CDC42BPB-209ENST00000634889 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
CDC42BPB-209ENST00000634889 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
CDC42BPB-209ENST00000634889 KRTAP4-9Q9BYQ8 210 aa4.84□□□□□ -1.63
CDC42BPB-209ENST00000634889 KRTAP5-4Q6L8H1 288 aa4.83□□□□□ -1.64
CDC42BPB-209ENST00000634889 LCE1DQ5T752 114 aa4.79□□□□□ -1.64
CDC42BPB-209ENST00000634889 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPB-209ENST00000634889 MT4P47944 62 aa4.75□□□□□ -1.65
CDC42BPB-209ENST00000634889 SVIPQ8NHG7 77 aa4.72□□□□□ -1.65
CDC42BPB-209ENST00000634889 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
CDC42BPB-209ENST00000634889 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
CDC42BPB-209ENST00000634889 GPR98Q8WXG9 6306 aa4.68□□□□□ -1.66
CDC42BPB-209ENST00000634889 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
CDC42BPB-209ENST00000634889 KRTAP4-6Q9BYQ5 205 aa4.64□□□□□ -1.67
CDC42BPB-209ENST00000634889 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
CDC42BPB-209ENST00000634889 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
CDC42BPB-209ENST00000634889 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
CDC42BPB-209ENST00000634889 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
CDC42BPB-209ENST00000634889 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
CDC42BPB-209ENST00000634889 MT1AP04731 61 aa4.49□□□□□ -1.69
CDC42BPB-209ENST00000634889 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
CDC42BPB-209ENST00000634889 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
CDC42BPB-209ENST00000634889 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
CDC42BPB-209ENST00000634889 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
CDC42BPB-209ENST00000634889 KRTAP5-3Q6L8H2 238 aa4.39□□□□□ -1.71
CDC42BPB-209ENST00000634889 KRTAP5-10Q6L8G5 202 aa4.34□□□□□ -1.71
CDC42BPB-209ENST00000634889 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
CDC42BPB-209ENST00000634889 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
CDC42BPB-209ENST00000634889 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
CDC42BPB-209ENST00000634889 KRTAP6-2Q3LI66 62 aa4.19□□□□□ -1.74
CDC42BPB-209ENST00000634889 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
CDC42BPB-209ENST00000634889 MT3P25713 68 aa4.1□□□□□ -1.75
CDC42BPB-209ENST00000634889 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
CDC42BPB-209ENST00000634889 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
CDC42BPB-209ENST00000634889 KRTAP5-8O75690 187 aa3.94□□□□□ -1.78
CDC42BPB-209ENST00000634889 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
CDC42BPB-209ENST00000634889 LUZP6Q538Z0 58 aa3.76□□□□□ -1.81
CDC42BPB-209ENST00000634889 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
CDC42BPB-209ENST00000634889 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
CDC42BPB-209ENST00000634889 AHNAKQ09666 5890 aaKnown RBP3.65□□□□□ -1.83
CDC42BPB-209ENST00000634889 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
CDC42BPB-209ENST00000634889 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
CDC42BPB-209ENST00000634889 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
CDC42BPB-209ENST00000634889 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
CDC42BPB-209ENST00000634889 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
CDC42BPB-209ENST00000634889 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
CDC42BPB-209ENST00000634889 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
CDC42BPB-209ENST00000634889 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
CDC42BPB-209ENST00000634889 H3BS24 57 aa3.2□□□□□ -1.9
CDC42BPB-209ENST00000634889 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
CDC42BPB-209ENST00000634889 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
CDC42BPB-209ENST00000634889 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
CDC42BPB-209ENST00000634889 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
CDC42BPB-209ENST00000634889 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
CDC42BPB-209ENST00000634889 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
CDC42BPB-209ENST00000634889 INE1O15225 51 aa2.69□□□□□ -1.98
CDC42BPB-209ENST00000634889 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
CDC42BPB-209ENST00000634889 PRM1P04553 51 aa2.65□□□□□ -1.99
CDC42BPB-209ENST00000634889 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
CDC42BPB-209ENST00000634889 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CDC42BPB-209ENST00000634889 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
CDC42BPB-209ENST00000634889 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 11.6 ms