RNA–Protein interactions for RNA: ENST00000630370.2

DDX3X-220, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5

Gene DDX3X, Length 3,120 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-220ENST00000630370 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
DDX3X-220ENST00000630370 MACF1Q9UPN3 7388 aaKnown RBP3.57□□□□□ -1.84
DDX3X-220ENST00000630370 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
DDX3X-220ENST00000630370 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
DDX3X-220ENST00000630370 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
DDX3X-220ENST00000630370 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
DDX3X-220ENST00000630370 LCE3CQ5T5A8 94 aa3.47□□□□□ -1.85
DDX3X-220ENST00000630370 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
DDX3X-220ENST00000630370 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
DDX3X-220ENST00000630370 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
DDX3X-220ENST00000630370 MDN1Q9NU22 5596 aa3.4□□□□□ -1.86
DDX3X-220ENST00000630370 MT1EP04732 61 aa3.4□□□□□ -1.86
DDX3X-220ENST00000630370 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.86
DDX3X-220ENST00000630370 SYNE1Q8NF91 8797 aaKnown RBP3.39□□□□□ -1.87
DDX3X-220ENST00000630370 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
DDX3X-220ENST00000630370 MT1LQ93083 61 aa3.37□□□□□ -1.87
DDX3X-220ENST00000630370 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
DDX3X-220ENST00000630370 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
DDX3X-220ENST00000630370 MT1GP13640 62 aa3.3□□□□□ -1.88
DDX3X-220ENST00000630370 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
DDX3X-220ENST00000630370 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
DDX3X-220ENST00000630370 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
DDX3X-220ENST00000630370 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
DDX3X-220ENST00000630370 KRTAP19-3Q7Z4W3 81 aa3.22□□□□□ -1.89
DDX3X-220ENST00000630370 MT1MQ8N339 61 aa3.21□□□□□ -1.9
DDX3X-220ENST00000630370 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
DDX3X-220ENST00000630370 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
DDX3X-220ENST00000630370 SPRR2EP22531 72 aa3.13□□□□□ -1.91
DDX3X-220ENST00000630370 SPRR2BP35325 72 aa3.13□□□□□ -1.91
DDX3X-220ENST00000630370 SPRR2AP35326 72 aa3.13□□□□□ -1.91
DDX3X-220ENST00000630370 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
DDX3X-220ENST00000630370 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.08□□□□□ -1.92
DDX3X-220ENST00000630370 KRTAP4-6Q9BYQ5 205 aa3.08□□□□□ -1.92
DDX3X-220ENST00000630370 LCE3BQ5TA77 95 aa3.06□□□□□ -1.92
DDX3X-220ENST00000630370 MT3P25713 68 aa3.01□□□□□ -1.93
DDX3X-220ENST00000630370 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
DDX3X-220ENST00000630370 SPRR2DP22532 72 aa2.98□□□□□ -1.93
DDX3X-220ENST00000630370 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
DDX3X-220ENST00000630370 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
DDX3X-220ENST00000630370 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
DDX3X-220ENST00000630370 KRTAP6-3Q3LI67 103 aa2.86□□□□□ -1.95
DDX3X-220ENST00000630370 NEBP20929 6669 aa2.83□□□□□ -1.96
DDX3X-220ENST00000630370 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
DDX3X-220ENST00000630370 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
DDX3X-220ENST00000630370 MT1AP04731 61 aa2.78□□□□□ -1.96
DDX3X-220ENST00000630370 MT4P47944 62 aa2.77□□□□□ -1.97
DDX3X-220ENST00000630370 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
DDX3X-220ENST00000630370 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
DDX3X-220ENST00000630370 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
DDX3X-220ENST00000630370 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
DDX3X-220ENST00000630370 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
DDX3X-220ENST00000630370 PRM1P04553 51 aa2.61□□□□□ -1.99
DDX3X-220ENST00000630370 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
DDX3X-220ENST00000630370 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
DDX3X-220ENST00000630370 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
DDX3X-220ENST00000630370 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
DDX3X-220ENST00000630370 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.02
DDX3X-220ENST00000630370 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
DDX3X-220ENST00000630370 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
DDX3X-220ENST00000630370 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
DDX3X-220ENST00000630370 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
DDX3X-220ENST00000630370 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
DDX3X-220ENST00000630370 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
DDX3X-220ENST00000630370 MUC5BQ9HC84 5762 aaPredicted RBP2.09□□□□□ -2.07
DDX3X-220ENST00000630370 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
DDX3X-220ENST00000630370 GPR98Q8WXG9 6306 aa2.03□□□□□ -2.08
DDX3X-220ENST00000630370 KRTAP5-8O75690 187 aa1.98□□□□□ -2.09
DDX3X-220ENST00000630370 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
DDX3X-220ENST00000630370 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
DDX3X-220ENST00000630370 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
DDX3X-220ENST00000630370 LCE1CQ5T751 118 aa1.91□□□□□ -2.1
DDX3X-220ENST00000630370 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
DDX3X-220ENST00000630370 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
DDX3X-220ENST00000630370 KRTAP21-2Q3LI59 83 aa1.82□□□□□ -2.12
DDX3X-220ENST00000630370 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.73□□□□□ -2.13
DDX3X-220ENST00000630370 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
DDX3X-220ENST00000630370 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
DDX3X-220ENST00000630370 MUC16Q8WXI7 14507 aa0.94□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 47.3 ms