RNA–Protein interactions for RNA: ENST00000628579.1

TMCO1-209, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 5 BASIC

Gene TMCO1, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-209ENST00000628579 UQCR11O14957 56 aa3.64□□□□□ -1.83
TMCO1-209ENST00000628579 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
TMCO1-209ENST00000628579 HMCN1Q96RW7 5635 aa3.61□□□□□ -1.83
TMCO1-209ENST00000628579 MT4P47944 62 aa3.6□□□□□ -1.83
TMCO1-209ENST00000628579 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
TMCO1-209ENST00000628579 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
TMCO1-209ENST00000628579 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
TMCO1-209ENST00000628579 MIR22HGQ0VDD5 57 aa3.56□□□□□ -1.84
TMCO1-209ENST00000628579 KRTAP5-4Q6L8H1 288 aa3.55□□□□□ -1.84
TMCO1-209ENST00000628579 PSPHP1O15172 72 aa3.52□□□□□ -1.85
TMCO1-209ENST00000628579 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
TMCO1-209ENST00000628579 KRTAP4-6Q9BYQ5 205 aa3.51□□□□□ -1.85
TMCO1-209ENST00000628579 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
TMCO1-209ENST00000628579 K7ERS5 55 aa3.46□□□□□ -1.86
TMCO1-209ENST00000628579 Q1T7F1 81 aa3.46□□□□□ -1.86
TMCO1-209ENST00000628579 V9GYY9 64 aa3.45□□□□□ -1.86
TMCO1-209ENST00000628579 KRTAP5-5Q701N2 237 aaPredicted RBP3.42□□□□□ -1.86
TMCO1-209ENST00000628579 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.87
TMCO1-209ENST00000628579 KRTAP5-10Q6L8G5 202 aa3.38□□□□□ -1.87
TMCO1-209ENST00000628579 A6NED7 52 aa3.37□□□□□ -1.87
TMCO1-209ENST00000628579 KRTAP20-2Q3LI61 65 aa3.36□□□□□ -1.87
TMCO1-209ENST00000628579 KRTAP23-1A1A580 65 aa3.35□□□□□ -1.87
TMCO1-209ENST00000628579 KRTAP15-1Q3LI76 137 aa3.35□□□□□ -1.87
TMCO1-209ENST00000628579 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
TMCO1-209ENST00000628579 SPRR5A0A1B0GTR4 108 aa3.32□□□□□ -1.88
TMCO1-209ENST00000628579 KRTAP19-4Q3LI73 84 aa3.32□□□□□ -1.88
TMCO1-209ENST00000628579 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
TMCO1-209ENST00000628579 PCP4P48539 62 aa3.3□□□□□ -1.88
TMCO1-209ENST00000628579 KRTAP12-4P60329 112 aa3.3□□□□□ -1.88
TMCO1-209ENST00000628579 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
TMCO1-209ENST00000628579 CDC42SE1Q9NRR8 79 aa3.3□□□□□ -1.88
TMCO1-209ENST00000628579 ROMO1P60602 79 aa3.25□□□□□ -1.89
TMCO1-209ENST00000628579 RPS28P62857 69 aaKnown RBP3.24□□□□□ -1.89
TMCO1-209ENST00000628579 KRTAP5-7Q6L8G8 165 aa3.24□□□□□ -1.89
TMCO1-209ENST00000628579 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
TMCO1-209ENST00000628579 MT1AP04731 61 aa3.17□□□□□ -1.9
TMCO1-209ENST00000628579 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
TMCO1-209ENST00000628579 KRTAP5-2Q701N4 177 aa3.11□□□□□ -1.91
TMCO1-209ENST00000628579 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
TMCO1-209ENST00000628579 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
TMCO1-209ENST00000628579 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
TMCO1-209ENST00000628579 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
TMCO1-209ENST00000628579 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
TMCO1-209ENST00000628579 MT3P25713 68 aa2.89□□□□□ -1.95
TMCO1-209ENST00000628579 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
TMCO1-209ENST00000628579 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
TMCO1-209ENST00000628579 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
TMCO1-209ENST00000628579 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
TMCO1-209ENST00000628579 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
TMCO1-209ENST00000628579 KRTAP9-9Q9BYP9 154 aa2.79□□□□□ -1.96
TMCO1-209ENST00000628579 PMAIP1Q13794 54 aa2.69□□□□□ -1.98
TMCO1-209ENST00000628579 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
TMCO1-209ENST00000628579 PRAC1Q96KF2 57 aa2.63□□□□□ -1.99
TMCO1-209ENST00000628579 PRO0628Q9UI54 55 aa2.57□□□□□ -2
TMCO1-209ENST00000628579 KRTAP4-2Q9BYR5 136 aa2.54□□□□□ -2
TMCO1-209ENST00000628579 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
TMCO1-209ENST00000628579 LCE1CQ5T751 118 aa2.46□□□□□ -2.02
TMCO1-209ENST00000628579 KTN1-AS1Q86SY8 53 aa2.44□□□□□ -2.02
TMCO1-209ENST00000628579 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
TMCO1-209ENST00000628579 SVIPQ8NHG7 77 aa2.35□□□□□ -2.03
TMCO1-209ENST00000628579 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
TMCO1-209ENST00000628579 KRTAP5-11Q6L8G4 156 aa2.24□□□□□ -2.05
TMCO1-209ENST00000628579 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
TMCO1-209ENST00000628579 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
TMCO1-209ENST00000628579 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
TMCO1-209ENST00000628579 LCE1FQ5T754 118 aa2.15□□□□□ -2.07
TMCO1-209ENST00000628579 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
TMCO1-209ENST00000628579 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
TMCO1-209ENST00000628579 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
TMCO1-209ENST00000628579 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
TMCO1-209ENST00000628579 NDUFAF8A1L188 74 aa1.83□□□□□ -2.12
TMCO1-209ENST00000628579 PRM1P04553 51 aa1.68□□□□□ -2.14
TMCO1-209ENST00000628579 A0A0A0MQY5 61 aa1.5□□□□□ -2.17
TMCO1-209ENST00000628579 INE1O15225 51 aa1.48□□□□□ -2.17
TMCO1-209ENST00000628579 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
TMCO1-209ENST00000628579 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
TMCO1-209ENST00000628579 H3BS24 57 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 77 ms