RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 TNP1P09430 55 aa6.05□□□□□ -1.44
LINC00628-201ENST00000628516 KRTAP4-9Q9BYQ8 210 aa6.03□□□□□ -1.44
LINC00628-201ENST00000628516 KRTAP19-5Q3LI72 72 aa5.99□□□□□ -1.45
LINC00628-201ENST00000628516 MT1GP13640 62 aa5.94□□□□□ -1.46
LINC00628-201ENST00000628516 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
LINC00628-201ENST00000628516 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
LINC00628-201ENST00000628516 PP632Q6XCG6 107 aa5.9□□□□□ -1.46
LINC00628-201ENST00000628516 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
LINC00628-201ENST00000628516 LCE1DQ5T752 114 aa5.84□□□□□ -1.47
LINC00628-201ENST00000628516 MT1MQ8N339 61 aa5.84□□□□□ -1.47
LINC00628-201ENST00000628516 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
LINC00628-201ENST00000628516 MT1LQ93083 61 aa5.83□□□□□ -1.48
LINC00628-201ENST00000628516 HMCN1Q96RW7 5635 aa5.81□□□□□ -1.48
LINC00628-201ENST00000628516 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
LINC00628-201ENST00000628516 AHNAK2Q8IVF2 5795 aa5.77□□□□□ -1.49
LINC00628-201ENST00000628516 ROMO1P60602 79 aa5.75□□□□□ -1.49
LINC00628-201ENST00000628516 MT4P47944 62 aa5.74□□□□□ -1.49
LINC00628-201ENST00000628516 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
LINC00628-201ENST00000628516 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
LINC00628-201ENST00000628516 KRTAP12-3P60328 96 aa5.7□□□□□ -1.5
LINC00628-201ENST00000628516 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
LINC00628-201ENST00000628516 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
LINC00628-201ENST00000628516 KRTAP5-4Q6L8H1 288 aa5.62□□□□□ -1.51
LINC00628-201ENST00000628516 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
LINC00628-201ENST00000628516 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
LINC00628-201ENST00000628516 PMAIP1Q13794 54 aa5.54□□□□□ -1.52
LINC00628-201ENST00000628516 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
LINC00628-201ENST00000628516 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
LINC00628-201ENST00000628516 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
LINC00628-201ENST00000628516 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
LINC00628-201ENST00000628516 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
LINC00628-201ENST00000628516 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
LINC00628-201ENST00000628516 KRTAP19-4Q3LI73 84 aa5.33□□□□□ -1.56
LINC00628-201ENST00000628516 KTN1-AS1Q86SY8 53 aa5.31□□□□□ -1.56
LINC00628-201ENST00000628516 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
LINC00628-201ENST00000628516 SPRR5A0A1B0GTR4 108 aa5.28□□□□□ -1.56
LINC00628-201ENST00000628516 LCE3CQ5T5A8 94 aa5.28□□□□□ -1.56
LINC00628-201ENST00000628516 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
LINC00628-201ENST00000628516 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
LINC00628-201ENST00000628516 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
LINC00628-201ENST00000628516 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
LINC00628-201ENST00000628516 MT1AP04731 61 aa4.96□□□□□ -1.62
LINC00628-201ENST00000628516 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
LINC00628-201ENST00000628516 KRTAP5-2Q701N4 177 aa4.9□□□□□ -1.63
LINC00628-201ENST00000628516 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
LINC00628-201ENST00000628516 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
LINC00628-201ENST00000628516 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
LINC00628-201ENST00000628516 MUC5ACP98088 5654 aa4.82□□□□□ -1.64
LINC00628-201ENST00000628516 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
LINC00628-201ENST00000628516 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
LINC00628-201ENST00000628516 KRTAP5-8O75690 187 aa4.74□□□□□ -1.65
LINC00628-201ENST00000628516 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
LINC00628-201ENST00000628516 KRTAP9-9Q9BYP9 154 aa4.58□□□□□ -1.68
LINC00628-201ENST00000628516 MT3P25713 68 aa4.55□□□□□ -1.68
LINC00628-201ENST00000628516 KRTAP4-12Q9BQ66 201 aa4.44□□□□□ -1.7
LINC00628-201ENST00000628516 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
LINC00628-201ENST00000628516 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
LINC00628-201ENST00000628516 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
LINC00628-201ENST00000628516 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
LINC00628-201ENST00000628516 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
LINC00628-201ENST00000628516 LCE1BQ5T7P3 118 aa3.99□□□□□ -1.77
LINC00628-201ENST00000628516 LCE1CQ5T751 118 aa3.89□□□□□ -1.79
LINC00628-201ENST00000628516 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
LINC00628-201ENST00000628516 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
LINC00628-201ENST00000628516 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
LINC00628-201ENST00000628516 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
LINC00628-201ENST00000628516 H3BS24 57 aa3.52□□□□□ -1.85
LINC00628-201ENST00000628516 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
LINC00628-201ENST00000628516 INE1O15225 51 aa3.49□□□□□ -1.85
LINC00628-201ENST00000628516 LCE1FQ5T754 118 aa3.47□□□□□ -1.85
LINC00628-201ENST00000628516 PHGR1C9JFL3 82 aa3.32□□□□□ -1.88
LINC00628-201ENST00000628516 KRTAP21-2Q3LI59 83 aa3.25□□□□□ -1.89
LINC00628-201ENST00000628516 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
LINC00628-201ENST00000628516 PRM1P04553 51 aa2.97□□□□□ -1.93
LINC00628-201ENST00000628516 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
LINC00628-201ENST00000628516 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
LINC00628-201ENST00000628516 MUC16Q8WXI7 14507 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 94.6 ms