RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 FRAS1Q86XX4 4008 aa3.48□□□□□ -1.85
VPS8-227ENST00000625842 LYSTQ99698 3801 aa3.48□□□□□ -1.85
VPS8-227ENST00000625842 DNAH7Q8WXX0 4024 aa3.47□□□□□ -1.85
VPS8-227ENST00000625842 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
VPS8-227ENST00000625842 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
VPS8-227ENST00000625842 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
VPS8-227ENST00000625842 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
VPS8-227ENST00000625842 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
VPS8-227ENST00000625842 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
VPS8-227ENST00000625842 MT1AP04731 61 aa3.37□□□□□ -1.87
VPS8-227ENST00000625842 ABCA13Q86UQ4 5058 aa3.36□□□□□ -1.87
VPS8-227ENST00000625842 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.87
VPS8-227ENST00000625842 KMT2AQ03164 3969 aa3.3□□□□□ -1.88
VPS8-227ENST00000625842 GPR98Q8WXG9 6306 aa3.29□□□□□ -1.88
VPS8-227ENST00000625842 HECTD4Q9Y4D8 3996 aa3.23□□□□□ -1.89
VPS8-227ENST00000625842 KRTAP4-7Q9BYR0 210 aa3.22□□□□□ -1.89
VPS8-227ENST00000625842 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
VPS8-227ENST00000625842 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
VPS8-227ENST00000625842 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
VPS8-227ENST00000625842 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
VPS8-227ENST00000625842 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
VPS8-227ENST00000625842 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
VPS8-227ENST00000625842 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
VPS8-227ENST00000625842 MACF1Q9UPN3 7388 aaKnown RBP3.14□□□□□ -1.91
VPS8-227ENST00000625842 KRTAP19-7Q3SYF9 63 aa3.13□□□□□ -1.91
VPS8-227ENST00000625842 KRTAP4-9Q9BYQ8 210 aa3.12□□□□□ -1.91
VPS8-227ENST00000625842 HMCN2Q8NDA2 5059 aa3.12□□□□□ -1.91
VPS8-227ENST00000625842 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
VPS8-227ENST00000625842 PKHD1P08F94 4074 aa3.11□□□□□ -1.91
VPS8-227ENST00000625842 FSIP2Q5CZC0 6907 aa3.08□□□□□ -1.92
VPS8-227ENST00000625842 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
VPS8-227ENST00000625842 MUC2Q02817 5179 aa3.07□□□□□ -1.92
VPS8-227ENST00000625842 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
VPS8-227ENST00000625842 FAT4Q6V0I7 4981 aa3.06□□□□□ -1.92
VPS8-227ENST00000625842 LOC100996750A0A140TA64 210 aa3.05□□□□□ -1.92
VPS8-227ENST00000625842 PRM1P04553 51 aa3.05□□□□□ -1.92
VPS8-227ENST00000625842 OBSCNQ5VST9 7968 aa3.04□□□□□ -1.92
VPS8-227ENST00000625842 KRTAP6-2Q3LI66 62 aa3□□□□□ -1.93
VPS8-227ENST00000625842 NEBP20929 6669 aa2.98□□□□□ -1.93
VPS8-227ENST00000625842 TNXBP22105 4242 aa2.96□□□□□ -1.93
VPS8-227ENST00000625842 LPAP08519 4548 aa2.92□□□□□ -1.94
VPS8-227ENST00000625842 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
VPS8-227ENST00000625842 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
VPS8-227ENST00000625842 KMT2DO14686 5537 aa2.67□□□□□ -1.98
VPS8-227ENST00000625842 MDN1Q9NU22 5596 aa2.65□□□□□ -1.98
VPS8-227ENST00000625842 KRTAP20-2Q3LI61 65 aa2.65□□□□□ -1.99
VPS8-227ENST00000625842 SSPOA2VEC9 5147 aa2.65□□□□□ -1.99
VPS8-227ENST00000625842 USH2AO75445 5202 aa2.64□□□□□ -1.99
VPS8-227ENST00000625842 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
VPS8-227ENST00000625842 FCGBPQ9Y6R7 5405 aaPredicted RBP2.61□□□□□ -1.99
VPS8-227ENST00000625842 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
VPS8-227ENST00000625842 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
VPS8-227ENST00000625842 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
VPS8-227ENST00000625842 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
VPS8-227ENST00000625842 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
VPS8-227ENST00000625842 KRTAP4-11Q9BYQ6 195 aa2.5□□□□□ -2.01
VPS8-227ENST00000625842 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
VPS8-227ENST00000625842 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
VPS8-227ENST00000625842 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
VPS8-227ENST00000625842 KRTAP4-12Q9BQ66 201 aa2.29□□□□□ -2.04
VPS8-227ENST00000625842 KRTAP4-2Q9BYR5 136 aa2.29□□□□□ -2.04
VPS8-227ENST00000625842 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
VPS8-227ENST00000625842 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
VPS8-227ENST00000625842 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
VPS8-227ENST00000625842 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
VPS8-227ENST00000625842 AHNAKQ09666 5890 aaKnown RBP2.05□□□□□ -2.08
VPS8-227ENST00000625842 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
VPS8-227ENST00000625842 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
VPS8-227ENST00000625842 KRTAP5-2Q701N4 177 aa1.82□□□□□ -2.12
VPS8-227ENST00000625842 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
VPS8-227ENST00000625842 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
VPS8-227ENST00000625842 KRTAP5-10Q6L8G5 202 aa1.63□□□□□ -2.15
VPS8-227ENST00000625842 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.16
VPS8-227ENST00000625842 KRTAP5-1Q6L8H4 278 aa1.55□□□□□ -2.16
VPS8-227ENST00000625842 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
VPS8-227ENST00000625842 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.48□□□□□ -2.17
VPS8-227ENST00000625842 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 112.9 ms