RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 KTN1-AS1Q86SY8 53 aa7.64□□□□□ -1.19
R3HCC1-210ENST00000625275 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
R3HCC1-210ENST00000625275 ROMO1P60602 79 aa7.47□□□□□ -1.21
R3HCC1-210ENST00000625275 LCE3AQ5TA76 89 aa7.46□□□□□ -1.22
R3HCC1-210ENST00000625275 KRTAP19-7Q3SYF9 63 aa7.43□□□□□ -1.22
R3HCC1-210ENST00000625275 LCE5AQ5TCM9 118 aa7.38□□□□□ -1.23
R3HCC1-210ENST00000625275 MT1EP04732 61 aa7.37□□□□□ -1.23
R3HCC1-210ENST00000625275 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
R3HCC1-210ENST00000625275 KRTAP19-3Q7Z4W3 81 aa7.35□□□□□ -1.23
R3HCC1-210ENST00000625275 PRAC1Q96KF2 57 aa7.29□□□□□ -1.24
R3HCC1-210ENST00000625275 DSTQ03001 7570 aaKnown RBP7.26□□□□□ -1.25
R3HCC1-210ENST00000625275 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
R3HCC1-210ENST00000625275 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
R3HCC1-210ENST00000625275 KRTAP4-9Q9BYQ8 210 aa7.16□□□□□ -1.26
R3HCC1-210ENST00000625275 MT1GP13640 62 aa7.15□□□□□ -1.27
R3HCC1-210ENST00000625275 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
R3HCC1-210ENST00000625275 MT1LQ93083 61 aa7.06□□□□□ -1.28
R3HCC1-210ENST00000625275 GPR98Q8WXG9 6306 aa7.06□□□□□ -1.28
R3HCC1-210ENST00000625275 MT1MQ8N339 61 aa7.04□□□□□ -1.28
R3HCC1-210ENST00000625275 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
R3HCC1-210ENST00000625275 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
R3HCC1-210ENST00000625275 MT4P47944 62 aa6.89□□□□□ -1.31
R3HCC1-210ENST00000625275 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
R3HCC1-210ENST00000625275 KRTAP4-3Q9BYR4 195 aa6.86□□□□□ -1.31
R3HCC1-210ENST00000625275 HMCN1Q96RW7 5635 aa6.83□□□□□ -1.32
R3HCC1-210ENST00000625275 KRTAP5-4Q6L8H1 288 aa6.79□□□□□ -1.32
R3HCC1-210ENST00000625275 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
R3HCC1-210ENST00000625275 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
R3HCC1-210ENST00000625275 KRTAP4-6Q9BYQ5 205 aa6.67□□□□□ -1.34
R3HCC1-210ENST00000625275 AHNAK2Q8IVF2 5795 aa6.67□□□□□ -1.34
R3HCC1-210ENST00000625275 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
R3HCC1-210ENST00000625275 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
R3HCC1-210ENST00000625275 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
R3HCC1-210ENST00000625275 KRTAP20-2Q3LI61 65 aa6.42□□□□□ -1.38
R3HCC1-210ENST00000625275 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.39
R3HCC1-210ENST00000625275 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
R3HCC1-210ENST00000625275 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
R3HCC1-210ENST00000625275 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
R3HCC1-210ENST00000625275 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
R3HCC1-210ENST00000625275 KRTAP9-6A8MVA2 160 aa6.31□□□□□ -1.4
R3HCC1-210ENST00000625275 H3BS24 57 aa6.21□□□□□ -1.42
R3HCC1-210ENST00000625275 SYNE1Q8NF91 8797 aaKnown RBP6.19□□□□□ -1.42
R3HCC1-210ENST00000625275 MT1AP04731 61 aa6.01□□□□□ -1.45
R3HCC1-210ENST00000625275 NDUFAF8A1L188 74 aa6□□□□□ -1.45
R3HCC1-210ENST00000625275 KRTAP6-1Q3LI64 71 aa5.96□□□□□ -1.46
R3HCC1-210ENST00000625275 KRTAP5-2Q701N4 177 aa5.93□□□□□ -1.46
R3HCC1-210ENST00000625275 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.47
R3HCC1-210ENST00000625275 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
R3HCC1-210ENST00000625275 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
R3HCC1-210ENST00000625275 KRTAP5-8O75690 187 aa5.71□□□□□ -1.5
R3HCC1-210ENST00000625275 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
R3HCC1-210ENST00000625275 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
R3HCC1-210ENST00000625275 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
R3HCC1-210ENST00000625275 AHNAKQ09666 5890 aaKnown RBP5.5□□□□□ -1.53
R3HCC1-210ENST00000625275 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
R3HCC1-210ENST00000625275 MT3P25713 68 aa5.46□□□□□ -1.53
R3HCC1-210ENST00000625275 MUC5BQ9HC84 5762 aaPredicted RBP5.46□□□□□ -1.54
R3HCC1-210ENST00000625275 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
R3HCC1-210ENST00000625275 KRTAP5-1Q6L8H4 278 aa5.33□□□□□ -1.56
R3HCC1-210ENST00000625275 LCE1EQ5T753 118 aa5.06□□□□□ -1.6
R3HCC1-210ENST00000625275 INE1O15225 51 aa5□□□□□ -1.61
R3HCC1-210ENST00000625275 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
R3HCC1-210ENST00000625275 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
R3HCC1-210ENST00000625275 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
R3HCC1-210ENST00000625275 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
R3HCC1-210ENST00000625275 LCE1CQ5T751 118 aa4.69□□□□□ -1.66
R3HCC1-210ENST00000625275 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
R3HCC1-210ENST00000625275 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
R3HCC1-210ENST00000625275 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
R3HCC1-210ENST00000625275 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
R3HCC1-210ENST00000625275 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
R3HCC1-210ENST00000625275 PRM1P04553 51 aa3.87□□□□□ -1.79
R3HCC1-210ENST00000625275 PHGR1C9JFL3 82 aa3.84□□□□□ -1.8
R3HCC1-210ENST00000625275 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
R3HCC1-210ENST00000625275 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
R3HCC1-210ENST00000625275 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
R3HCC1-210ENST00000625275 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 52 ms