RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 SPRR2EP22531 72 aa7.06□□□□□ -1.28
CIRBP-245ENST00000621399 SPRR2BP35325 72 aa7.06□□□□□ -1.28
CIRBP-245ENST00000621399 SPRR2AP35326 72 aa7.06□□□□□ -1.28
CIRBP-245ENST00000621399 LCE1AQ5T7P2 110 aa7□□□□□ -1.29
CIRBP-245ENST00000621399 KRTAP19-7Q3SYF9 63 aa6.95□□□□□ -1.3
CIRBP-245ENST00000621399 KRTAP2-2Q9BYT5 123 aa6.94□□□□□ -1.3
CIRBP-245ENST00000621399 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
CIRBP-245ENST00000621399 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
CIRBP-245ENST00000621399 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
CIRBP-245ENST00000621399 KRTAP4-2Q9BYR5 136 aa6.9□□□□□ -1.3
CIRBP-245ENST00000621399 KRTAP19-5Q3LI72 72 aa6.89□□□□□ -1.31
CIRBP-245ENST00000621399 MT1EP04732 61 aa6.87□□□□□ -1.31
CIRBP-245ENST00000621399 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
CIRBP-245ENST00000621399 KRTAP4-11Q9BYQ6 195 aa6.83□□□□□ -1.32
CIRBP-245ENST00000621399 SPRR2DP22532 72 aa6.82□□□□□ -1.32
CIRBP-245ENST00000621399 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
CIRBP-245ENST00000621399 KRTAP19-3Q7Z4W3 81 aa6.74□□□□□ -1.33
CIRBP-245ENST00000621399 ROMO1P60602 79 aa6.72□□□□□ -1.33
CIRBP-245ENST00000621399 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
CIRBP-245ENST00000621399 MT1GP13640 62 aa6.63□□□□□ -1.35
CIRBP-245ENST00000621399 MT1LQ93083 61 aa6.63□□□□□ -1.35
CIRBP-245ENST00000621399 GPR98Q8WXG9 6306 aa6.61□□□□□ -1.35
CIRBP-245ENST00000621399 KRTAP23-1A1A580 65 aa6.61□□□□□ -1.35
CIRBP-245ENST00000621399 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
CIRBP-245ENST00000621399 BRK1Q8WUW1 75 aa6.58□□□□□ -1.36
CIRBP-245ENST00000621399 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
CIRBP-245ENST00000621399 MT1MQ8N339 61 aa6.52□□□□□ -1.37
CIRBP-245ENST00000621399 KRTAP4-3Q9BYR4 195 aa6.37□□□□□ -1.39
CIRBP-245ENST00000621399 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
CIRBP-245ENST00000621399 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
CIRBP-245ENST00000621399 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
CIRBP-245ENST00000621399 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
CIRBP-245ENST00000621399 KRTAP5-3Q6L8H2 238 aa6.05□□□□□ -1.44
CIRBP-245ENST00000621399 PRO0628Q9UI54 55 aa6.04□□□□□ -1.44
CIRBP-245ENST00000621399 AHNAK2Q8IVF2 5795 aa6.02□□□□□ -1.45
CIRBP-245ENST00000621399 MT4P47944 62 aa6□□□□□ -1.45
CIRBP-245ENST00000621399 KRTAP5-4Q6L8H1 288 aa5.98□□□□□ -1.45
CIRBP-245ENST00000621399 KRTAP5-5Q701N2 237 aaPredicted RBP5.93□□□□□ -1.46
CIRBP-245ENST00000621399 KRTAP5-10Q6L8G5 202 aa5.91□□□□□ -1.46
CIRBP-245ENST00000621399 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
CIRBP-245ENST00000621399 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
CIRBP-245ENST00000621399 KRTAP5-7Q6L8G8 165 aa5.73□□□□□ -1.49
CIRBP-245ENST00000621399 KRTAP12-4P60329 112 aa5.72□□□□□ -1.49
CIRBP-245ENST00000621399 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
CIRBP-245ENST00000621399 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
CIRBP-245ENST00000621399 SPRR5A0A1B0GTR4 108 aa5.65□□□□□ -1.5
CIRBP-245ENST00000621399 MT1AP04731 61 aa5.65□□□□□ -1.5
CIRBP-245ENST00000621399 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
CIRBP-245ENST00000621399 KRTAP6-1Q3LI64 71 aa5.59□□□□□ -1.51
CIRBP-245ENST00000621399 SVIPQ8NHG7 77 aa5.45□□□□□ -1.54
CIRBP-245ENST00000621399 KRTAP5-2Q701N4 177 aa5.3□□□□□ -1.56
CIRBP-245ENST00000621399 KRTAP6-2Q3LI66 62 aa5.29□□□□□ -1.56
CIRBP-245ENST00000621399 MT3P25713 68 aa5.17□□□□□ -1.58
CIRBP-245ENST00000621399 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
CIRBP-245ENST00000621399 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
CIRBP-245ENST00000621399 MUC5ACP98088 5654 aa5.02□□□□□ -1.61
CIRBP-245ENST00000621399 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
CIRBP-245ENST00000621399 KRTAP5-8O75690 187 aa4.98□□□□□ -1.61
CIRBP-245ENST00000621399 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
CIRBP-245ENST00000621399 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
CIRBP-245ENST00000621399 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
CIRBP-245ENST00000621399 KRTAP5-11Q6L8G4 156 aa4.61□□□□□ -1.67
CIRBP-245ENST00000621399 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.58□□□□□ -1.68
CIRBP-245ENST00000621399 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
CIRBP-245ENST00000621399 LCE1BQ5T7P3 118 aa4.37□□□□□ -1.71
CIRBP-245ENST00000621399 LCE3EQ5T5B0 92 aa4.32□□□□□ -1.72
CIRBP-245ENST00000621399 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
CIRBP-245ENST00000621399 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
CIRBP-245ENST00000621399 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
CIRBP-245ENST00000621399 LCE1FQ5T754 118 aa4.01□□□□□ -1.77
CIRBP-245ENST00000621399 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
CIRBP-245ENST00000621399 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
CIRBP-245ENST00000621399 INE1O15225 51 aa3.52□□□□□ -1.85
CIRBP-245ENST00000621399 PHGR1C9JFL3 82 aa3.45□□□□□ -1.86
CIRBP-245ENST00000621399 PRM1P04553 51 aa3.45□□□□□ -1.86
CIRBP-245ENST00000621399 MUC19Q7Z5P9 8384 aa3.04□□□□□ -1.92
CIRBP-245ENST00000621399 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
CIRBP-245ENST00000621399 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 161.4 ms