RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 CCDC179H3BU77 68 aa8.24□□□□□ -1.09
ATXN3-253ENST00000621269 ATP5EP56381 51 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-253ENST00000621269 KRTAP5-4Q6L8H1 288 aa8.23□□□□□ -1.09
ATXN3-253ENST00000621269 LINC01558Q9Y6Z2 57 aa8.19□□□□□ -1.1
ATXN3-253ENST00000621269 KRTAP12-3P60328 96 aa8.16□□□□□ -1.1
ATXN3-253ENST00000621269 KRTAP4-6Q9BYQ5 205 aa8.11□□□□□ -1.11
ATXN3-253ENST00000621269 KRTAP4-7Q9BYR0 210 aa8.1□□□□□ -1.11
ATXN3-253ENST00000621269 UQCR11O14957 56 aa8.07□□□□□ -1.12
ATXN3-253ENST00000621269 AHNAK2Q8IVF2 5795 aa8.01□□□□□ -1.13
ATXN3-253ENST00000621269 KRTAP5-10Q6L8G5 202 aa7.96□□□□□ -1.14
ATXN3-253ENST00000621269 TMEM258P61165 79 aa7.93□□□□□ -1.14
ATXN3-253ENST00000621269 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.14
ATXN3-253ENST00000621269 MIR22HGQ0VDD5 57 aa7.86□□□□□ -1.15
ATXN3-253ENST00000621269 KRTAP5-5Q701N2 237 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-253ENST00000621269 K7ERS5 55 aa7.8□□□□□ -1.16
ATXN3-253ENST00000621269 KRTAP20-2Q3LI61 65 aa7.8□□□□□ -1.16
ATXN3-253ENST00000621269 SPRR5A0A1B0GTR4 108 aa7.75□□□□□ -1.17
ATXN3-253ENST00000621269 KRTAP5-3Q6L8H2 238 aa7.75□□□□□ -1.17
ATXN3-253ENST00000621269 KRTAP12-4P60329 112 aa7.73□□□□□ -1.17
ATXN3-253ENST00000621269 KRTAP19-4Q3LI73 84 aa7.7□□□□□ -1.18
ATXN3-253ENST00000621269 KRTAP5-7Q6L8G8 165 aa7.69□□□□□ -1.18
ATXN3-253ENST00000621269 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
ATXN3-253ENST00000621269 V9GYY9 64 aa7.6□□□□□ -1.19
ATXN3-253ENST00000621269 PSPHP1O15172 72 aa7.59□□□□□ -1.19
ATXN3-253ENST00000621269 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
ATXN3-253ENST00000621269 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
ATXN3-253ENST00000621269 Q1T7F1 81 aa7.49□□□□□ -1.21
ATXN3-253ENST00000621269 LCE3CQ5T5A8 94 aa7.49□□□□□ -1.21
ATXN3-253ENST00000621269 SYNE1Q8NF91 8797 aaKnown RBP7.46□□□□□ -1.21
ATXN3-253ENST00000621269 A6NED7 52 aa7.33□□□□□ -1.24
ATXN3-253ENST00000621269 CDC42SE1Q9NRR8 79 aa7.33□□□□□ -1.24
ATXN3-253ENST00000621269 MT1AP04731 61 aa7.25□□□□□ -1.25
ATXN3-253ENST00000621269 KRTAP6-1Q3LI64 71 aa7.21□□□□□ -1.26
ATXN3-253ENST00000621269 RPS28P62857 69 aaKnown RBP7.2□□□□□ -1.26
ATXN3-253ENST00000621269 ROMO1P60602 79 aa7.19□□□□□ -1.26
ATXN3-253ENST00000621269 KRTAP5-2Q701N4 177 aa7.17□□□□□ -1.26
ATXN3-253ENST00000621269 KRTAP4-11Q9BYQ6 195 aa7.17□□□□□ -1.26
ATXN3-253ENST00000621269 KRTAP9-4Q9BYQ2 154 aa7.05□□□□□ -1.28
ATXN3-253ENST00000621269 KRTAP9-6A8MVA2 160 aa7.02□□□□□ -1.29
ATXN3-253ENST00000621269 KRTAP6-2Q3LI66 62 aa6.95□□□□□ -1.3
ATXN3-253ENST00000621269 KRTAP5-8O75690 187 aa6.92□□□□□ -1.3
ATXN3-253ENST00000621269 OBSCNQ5VST9 7968 aa6.7□□□□□ -1.34
ATXN3-253ENST00000621269 MT3P25713 68 aa6.67□□□□□ -1.34
ATXN3-253ENST00000621269 MUC5ACP98088 5654 aa6.65□□□□□ -1.34
ATXN3-253ENST00000621269 KRTAP9-9Q9BYP9 154 aa6.64□□□□□ -1.35
ATXN3-253ENST00000621269 MUC5BQ9HC84 5762 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-253ENST00000621269 AHNAKQ09666 5890 aaKnown RBP6.61□□□□□ -1.35
ATXN3-253ENST00000621269 PCP4P48539 62 aa6.51□□□□□ -1.37
ATXN3-253ENST00000621269 KRTAP5-1Q6L8H4 278 aa6.47□□□□□ -1.37
ATXN3-253ENST00000621269 KRTAP4-12Q9BQ66 201 aa6.33□□□□□ -1.4
ATXN3-253ENST00000621269 H3BS24 57 aa6.15□□□□□ -1.42
ATXN3-253ENST00000621269 LCE1EQ5T753 118 aa6.15□□□□□ -1.42
ATXN3-253ENST00000621269 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
ATXN3-253ENST00000621269 LCE1BQ5T7P3 118 aa5.84□□□□□ -1.47
ATXN3-253ENST00000621269 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
ATXN3-253ENST00000621269 LCE1CQ5T751 118 aa5.71□□□□□ -1.5
ATXN3-253ENST00000621269 PMAIP1Q13794 54 aa5.65□□□□□ -1.5
ATXN3-253ENST00000621269 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
ATXN3-253ENST00000621269 LCE3DQ9BYE3 92 aa5.38□□□□□ -1.55
ATXN3-253ENST00000621269 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
ATXN3-253ENST00000621269 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-253ENST00000621269 LCE1FQ5T754 118 aa5.1□□□□□ -1.59
ATXN3-253ENST00000621269 LCE3EQ5T5B0 92 aa5.02□□□□□ -1.61
ATXN3-253ENST00000621269 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
ATXN3-253ENST00000621269 KTN1-AS1Q86SY8 53 aa4.8□□□□□ -1.64
ATXN3-253ENST00000621269 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
ATXN3-253ENST00000621269 KRTAP21-2Q3LI59 83 aa4.74□□□□□ -1.65
ATXN3-253ENST00000621269 SVIPQ8NHG7 77 aa4.71□□□□□ -1.66
ATXN3-253ENST00000621269 PHGR1C9JFL3 82 aa4.68□□□□□ -1.66
ATXN3-253ENST00000621269 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
ATXN3-253ENST00000621269 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
ATXN3-253ENST00000621269 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
ATXN3-253ENST00000621269 PRM1P04553 51 aa3.65□□□□□ -1.83
ATXN3-253ENST00000621269 KRTAP21-1Q3LI58 79 aa3.56□□□□□ -1.84
ATXN3-253ENST00000621269 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
ATXN3-253ENST00000621269 MUC16Q8WXI7 14507 aa2.95□□□□□ -1.94
ATXN3-253ENST00000621269 INE1O15225 51 aa2.71□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 79.3 ms