RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
SNHG28-203ENST00000621242 KRTAP19-7Q3SYF9 63 aa5.85□□□□□ -1.47
SNHG28-203ENST00000621242 AHNAK2Q8IVF2 5795 aa5.85□□□□□ -1.47
SNHG28-203ENST00000621242 MT4P47944 62 aa5.84□□□□□ -1.47
SNHG28-203ENST00000621242 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
SNHG28-203ENST00000621242 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
SNHG28-203ENST00000621242 MT1EP04732 61 aa5.82□□□□□ -1.48
SNHG28-203ENST00000621242 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
SNHG28-203ENST00000621242 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
SNHG28-203ENST00000621242 KRTAP5-10Q6L8G5 202 aa5.78□□□□□ -1.48
SNHG28-203ENST00000621242 A6NED7 52 aa5.76□□□□□ -1.49
SNHG28-203ENST00000621242 MT1GP13640 62 aa5.67□□□□□ -1.5
SNHG28-203ENST00000621242 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
SNHG28-203ENST00000621242 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
SNHG28-203ENST00000621242 PP632Q6XCG6 107 aa5.61□□□□□ -1.51
SNHG28-203ENST00000621242 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
SNHG28-203ENST00000621242 KRTAP5-4Q6L8H1 288 aa5.6□□□□□ -1.51
SNHG28-203ENST00000621242 K7ERS5 55 aa5.58□□□□□ -1.52
SNHG28-203ENST00000621242 MT1MQ8N339 61 aa5.58□□□□□ -1.52
SNHG28-203ENST00000621242 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
SNHG28-203ENST00000621242 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
SNHG28-203ENST00000621242 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
SNHG28-203ENST00000621242 KRTAP4-3Q9BYR4 195 aa5.5□□□□□ -1.53
SNHG28-203ENST00000621242 TNP1P09430 55 aa5.49□□□□□ -1.53
SNHG28-203ENST00000621242 MT1LQ93083 61 aa5.47□□□□□ -1.53
SNHG28-203ENST00000621242 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
SNHG28-203ENST00000621242 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
SNHG28-203ENST00000621242 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
SNHG28-203ENST00000621242 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
SNHG28-203ENST00000621242 ROMO1P60602 79 aa5.33□□□□□ -1.56
SNHG28-203ENST00000621242 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
SNHG28-203ENST00000621242 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
SNHG28-203ENST00000621242 KRTAP9-4Q9BYQ2 154 aa5.3□□□□□ -1.56
SNHG28-203ENST00000621242 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
SNHG28-203ENST00000621242 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
SNHG28-203ENST00000621242 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
SNHG28-203ENST00000621242 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
SNHG28-203ENST00000621242 KRTAP5-5Q701N2 237 aaPredicted RBP5.16□□□□□ -1.58
SNHG28-203ENST00000621242 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
SNHG28-203ENST00000621242 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
SNHG28-203ENST00000621242 PMAIP1Q13794 54 aa5.05□□□□□ -1.6
SNHG28-203ENST00000621242 PRO0628Q9UI54 55 aa5□□□□□ -1.61
SNHG28-203ENST00000621242 KRTAP4-11Q9BYQ6 195 aa4.98□□□□□ -1.61
SNHG28-203ENST00000621242 AHNAKQ09666 5890 aaKnown RBP4.92□□□□□ -1.62
SNHG28-203ENST00000621242 MUC5BQ9HC84 5762 aaPredicted RBP4.91□□□□□ -1.62
SNHG28-203ENST00000621242 MUC5ACP98088 5654 aa4.91□□□□□ -1.62
SNHG28-203ENST00000621242 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
SNHG28-203ENST00000621242 KRTAP5-8O75690 187 aa4.84□□□□□ -1.63
SNHG28-203ENST00000621242 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
SNHG28-203ENST00000621242 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
SNHG28-203ENST00000621242 OBSCNQ5VST9 7968 aa4.76□□□□□ -1.65
SNHG28-203ENST00000621242 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
SNHG28-203ENST00000621242 KRTAP6-1Q3LI64 71 aa4.67□□□□□ -1.66
SNHG28-203ENST00000621242 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
SNHG28-203ENST00000621242 MT1AP04731 61 aa4.64□□□□□ -1.67
SNHG28-203ENST00000621242 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
SNHG28-203ENST00000621242 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
SNHG28-203ENST00000621242 KRTAP5-1Q6L8H4 278 aa4.42□□□□□ -1.7
SNHG28-203ENST00000621242 MT3P25713 68 aa4.27□□□□□ -1.73
SNHG28-203ENST00000621242 LCE1EQ5T753 118 aa4.02□□□□□ -1.77
SNHG28-203ENST00000621242 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
SNHG28-203ENST00000621242 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
SNHG28-203ENST00000621242 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
SNHG28-203ENST00000621242 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
SNHG28-203ENST00000621242 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
SNHG28-203ENST00000621242 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
SNHG28-203ENST00000621242 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
SNHG28-203ENST00000621242 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
SNHG28-203ENST00000621242 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SNHG28-203ENST00000621242 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
SNHG28-203ENST00000621242 KRTAP21-2Q3LI59 83 aa3.08□□□□□ -1.92
SNHG28-203ENST00000621242 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.93
SNHG28-203ENST00000621242 KRTAP4-4Q9BYR3 166 aa2.93□□□□□ -1.94
SNHG28-203ENST00000621242 INE1O15225 51 aa2.88□□□□□ -1.95
SNHG28-203ENST00000621242 PRM1P04553 51 aa2.78□□□□□ -1.96
SNHG28-203ENST00000621242 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
SNHG28-203ENST00000621242 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 114.3 ms