RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
AGRN-210ENST00000620552 PRM1P04553 51 aa4.27□□□□□ -1.73
AGRN-210ENST00000620552 HERC2O95714 4834 aa4.23□□□□□ -1.73
AGRN-210ENST00000620552 HERC1Q15751 4861 aa4.22□□□□□ -1.73
AGRN-210ENST00000620552 KMT2CQ8NEZ4 4911 aaKnown RBP4.2□□□□□ -1.74
AGRN-210ENST00000620552 KIAA1109Q2LD37 5005 aa4.19□□□□□ -1.74
AGRN-210ENST00000620552 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.74
AGRN-210ENST00000620552 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
AGRN-210ENST00000620552 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
AGRN-210ENST00000620552 LCE2AQ5TA79 106 aaPredicted RBP4.1□□□□□ -1.75
AGRN-210ENST00000620552 LCE1CQ5T751 118 aa4.09□□□□□ -1.75
AGRN-210ENST00000620552 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
AGRN-210ENST00000620552 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
AGRN-210ENST00000620552 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
AGRN-210ENST00000620552 BIRC6Q9NR09 4857 aa4.09□□□□□ -1.76
AGRN-210ENST00000620552 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
AGRN-210ENST00000620552 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
AGRN-210ENST00000620552 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
AGRN-210ENST00000620552 MT1AP04731 61 aa4.03□□□□□ -1.76
AGRN-210ENST00000620552 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
AGRN-210ENST00000620552 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
AGRN-210ENST00000620552 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
AGRN-210ENST00000620552 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
AGRN-210ENST00000620552 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
AGRN-210ENST00000620552 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
AGRN-210ENST00000620552 EPPK1P58107 5090 aaKnown RBP3.89□□□□□ -1.79
AGRN-210ENST00000620552 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
AGRN-210ENST00000620552 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
AGRN-210ENST00000620552 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
AGRN-210ENST00000620552 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
AGRN-210ENST00000620552 KRTAP9-4Q9BYQ2 154 aa3.81□□□□□ -1.8
AGRN-210ENST00000620552 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
AGRN-210ENST00000620552 MUC2Q02817 5179 aa3.74□□□□□ -1.81
AGRN-210ENST00000620552 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
AGRN-210ENST00000620552 KRTAP9-6A8MVA2 160 aa3.65□□□□□ -1.83
AGRN-210ENST00000620552 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
AGRN-210ENST00000620552 ABCA13Q86UQ4 5058 aa3.62□□□□□ -1.83
AGRN-210ENST00000620552 OBSCNQ5VST9 7968 aa3.6□□□□□ -1.83
AGRN-210ENST00000620552 UBR4Q5T4S7 5183 aa3.55□□□□□ -1.84
AGRN-210ENST00000620552 RNF213Q63HN8 5207 aa3.51□□□□□ -1.85
AGRN-210ENST00000620552 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
AGRN-210ENST00000620552 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
AGRN-210ENST00000620552 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
AGRN-210ENST00000620552 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
AGRN-210ENST00000620552 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
AGRN-210ENST00000620552 KMT2DO14686 5537 aa3.21□□□□□ -1.9
AGRN-210ENST00000620552 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
AGRN-210ENST00000620552 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
AGRN-210ENST00000620552 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
AGRN-210ENST00000620552 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
AGRN-210ENST00000620552 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
AGRN-210ENST00000620552 USH2AO75445 5202 aa3.04□□□□□ -1.92
AGRN-210ENST00000620552 NEBP20929 6669 aa3.03□□□□□ -1.92
AGRN-210ENST00000620552 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
AGRN-210ENST00000620552 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.94
AGRN-210ENST00000620552 SSPOA2VEC9 5147 aa2.88□□□□□ -1.95
AGRN-210ENST00000620552 MUC12Q9UKN1 5478 aa2.73□□□□□ -1.97
AGRN-210ENST00000620552 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
AGRN-210ENST00000620552 MDN1Q9NU22 5596 aa2.62□□□□□ -1.99
AGRN-210ENST00000620552 GPR98Q8WXG9 6306 aa2.58□□□□□ -2
AGRN-210ENST00000620552 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
AGRN-210ENST00000620552 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
AGRN-210ENST00000620552 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
AGRN-210ENST00000620552 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
AGRN-210ENST00000620552 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
AGRN-210ENST00000620552 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
AGRN-210ENST00000620552 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
AGRN-210ENST00000620552 KRTAP5-1Q6L8H4 278 aa1.99□□□□□ -2.09
AGRN-210ENST00000620552 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
AGRN-210ENST00000620552 MUC5BQ9HC84 5762 aaPredicted RBP1.95□□□□□ -2.1
AGRN-210ENST00000620552 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.1
AGRN-210ENST00000620552 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
AGRN-210ENST00000620552 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
AGRN-210ENST00000620552 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
AGRN-210ENST00000620552 KRTAP5-7Q6L8G8 165 aa1.65□□□□□ -2.14
AGRN-210ENST00000620552 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
AGRN-210ENST00000620552 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 133 ms