RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
SHANK2-221ENST00000618363 CCDC179H3BU77 68 aa4.35□□□□□ -1.71
SHANK2-221ENST00000618363 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
SHANK2-221ENST00000618363 A8MU10 97 aa4.34□□□□□ -1.71
SHANK2-221ENST00000618363 MT1EP04732 61 aa4.34□□□□□ -1.71
SHANK2-221ENST00000618363 KRTAP19-3Q7Z4W3 81 aa4.33□□□□□ -1.72
SHANK2-221ENST00000618363 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
SHANK2-221ENST00000618363 TNP1P09430 55 aa4.3□□□□□ -1.72
SHANK2-221ENST00000618363 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
SHANK2-221ENST00000618363 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
SHANK2-221ENST00000618363 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
SHANK2-221ENST00000618363 MT1GP13640 62 aa4.25□□□□□ -1.73
SHANK2-221ENST00000618363 MT3P25713 68 aa4.24□□□□□ -1.73
SHANK2-221ENST00000618363 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
SHANK2-221ENST00000618363 TMEM258P61165 79 aa4.23□□□□□ -1.73
SHANK2-221ENST00000618363 UQCR11O14957 56 aa4.21□□□□□ -1.74
SHANK2-221ENST00000618363 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
SHANK2-221ENST00000618363 LCE3AQ5TA76 89 aa4.19□□□□□ -1.74
SHANK2-221ENST00000618363 MT1LQ93083 61 aa4.15□□□□□ -1.75
SHANK2-221ENST00000618363 MT1MQ8N339 61 aa4.14□□□□□ -1.75
SHANK2-221ENST00000618363 K7ERS5 55 aa4.12□□□□□ -1.75
SHANK2-221ENST00000618363 MIR22HGQ0VDD5 57 aa4.11□□□□□ -1.75
SHANK2-221ENST00000618363 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
SHANK2-221ENST00000618363 V9GYY9 64 aa4.07□□□□□ -1.76
SHANK2-221ENST00000618363 KRTAP12-3P60328 96 aa4.06□□□□□ -1.76
SHANK2-221ENST00000618363 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
SHANK2-221ENST00000618363 MT4P47944 62 aa4.02□□□□□ -1.77
SHANK2-221ENST00000618363 KRTAP4-3Q9BYR4 195 aa4.01□□□□□ -1.77
SHANK2-221ENST00000618363 PSPHP1O15172 72 aa4□□□□□ -1.77
SHANK2-221ENST00000618363 GPR98Q8WXG9 6306 aa4□□□□□ -1.77
SHANK2-221ENST00000618363 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
SHANK2-221ENST00000618363 Q1T7F1 81 aa3.97□□□□□ -1.77
SHANK2-221ENST00000618363 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
SHANK2-221ENST00000618363 A6NED7 52 aa3.91□□□□□ -1.78
SHANK2-221ENST00000618363 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.79
SHANK2-221ENST00000618363 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
SHANK2-221ENST00000618363 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
SHANK2-221ENST00000618363 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
SHANK2-221ENST00000618363 ROMO1P60602 79 aa3.75□□□□□ -1.81
SHANK2-221ENST00000618363 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
SHANK2-221ENST00000618363 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
SHANK2-221ENST00000618363 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
SHANK2-221ENST00000618363 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
SHANK2-221ENST00000618363 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
SHANK2-221ENST00000618363 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
SHANK2-221ENST00000618363 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
SHANK2-221ENST00000618363 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
SHANK2-221ENST00000618363 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
SHANK2-221ENST00000618363 MT1AP04731 61 aa3.55□□□□□ -1.84
SHANK2-221ENST00000618363 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SHANK2-221ENST00000618363 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
SHANK2-221ENST00000618363 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
SHANK2-221ENST00000618363 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
SHANK2-221ENST00000618363 KRTAP6-2Q3LI66 62 aa3.37□□□□□ -1.87
SHANK2-221ENST00000618363 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
SHANK2-221ENST00000618363 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
SHANK2-221ENST00000618363 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
SHANK2-221ENST00000618363 KRTAP5-8O75690 187 aa3.27□□□□□ -1.89
SHANK2-221ENST00000618363 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
SHANK2-221ENST00000618363 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
SHANK2-221ENST00000618363 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
SHANK2-221ENST00000618363 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
SHANK2-221ENST00000618363 MUC5ACP98088 5654 aa3.09□□□□□ -1.92
SHANK2-221ENST00000618363 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
SHANK2-221ENST00000618363 PRO0628Q9UI54 55 aa2.88□□□□□ -1.95
SHANK2-221ENST00000618363 LCE1BQ5T7P3 118 aa2.85□□□□□ -1.95
SHANK2-221ENST00000618363 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
SHANK2-221ENST00000618363 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SHANK2-221ENST00000618363 KTN1-AS1Q86SY8 53 aa2.73□□□□□ -1.97
SHANK2-221ENST00000618363 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
SHANK2-221ENST00000618363 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
SHANK2-221ENST00000618363 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
SHANK2-221ENST00000618363 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
SHANK2-221ENST00000618363 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
SHANK2-221ENST00000618363 PRM1P04553 51 aa1.9□□□□□ -2.11
SHANK2-221ENST00000618363 INE1O15225 51 aa1.74□□□□□ -2.13
SHANK2-221ENST00000618363 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
SHANK2-221ENST00000618363 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 132.6 ms