RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 MT1LQ93083 61 aa5.52□□□□□ -1.53
SRGAP2C-205ENST00000617209 PSPHP1O15172 72 aa5.5□□□□□ -1.53
SRGAP2C-205ENST00000617209 K7ERS5 55 aa5.47□□□□□ -1.53
SRGAP2C-205ENST00000617209 MT1MQ8N339 61 aa5.47□□□□□ -1.53
SRGAP2C-205ENST00000617209 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
SRGAP2C-205ENST00000617209 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
SRGAP2C-205ENST00000617209 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
SRGAP2C-205ENST00000617209 A6NED7 52 aa5.33□□□□□ -1.56
SRGAP2C-205ENST00000617209 PCP4P48539 62 aa5.32□□□□□ -1.56
SRGAP2C-205ENST00000617209 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
SRGAP2C-205ENST00000617209 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
SRGAP2C-205ENST00000617209 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
SRGAP2C-205ENST00000617209 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
SRGAP2C-205ENST00000617209 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
SRGAP2C-205ENST00000617209 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
SRGAP2C-205ENST00000617209 LCE1DQ5T752 114 aa5.19□□□□□ -1.58
SRGAP2C-205ENST00000617209 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
SRGAP2C-205ENST00000617209 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
SRGAP2C-205ENST00000617209 ROMO1P60602 79 aa5.12□□□□□ -1.59
SRGAP2C-205ENST00000617209 MT4P47944 62 aa5.11□□□□□ -1.59
SRGAP2C-205ENST00000617209 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
SRGAP2C-205ENST00000617209 KRTAP15-1Q3LI76 137 aa5.1□□□□□ -1.59
SRGAP2C-205ENST00000617209 GPR98Q8WXG9 6306 aa5.05□□□□□ -1.6
SRGAP2C-205ENST00000617209 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
SRGAP2C-205ENST00000617209 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
SRGAP2C-205ENST00000617209 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
SRGAP2C-205ENST00000617209 LOC100996750A0A140TA64 210 aa4.93□□□□□ -1.62
SRGAP2C-205ENST00000617209 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
SRGAP2C-205ENST00000617209 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
SRGAP2C-205ENST00000617209 KRTAP20-2Q3LI61 65 aa4.86□□□□□ -1.63
SRGAP2C-205ENST00000617209 AHNAK2Q8IVF2 5795 aa4.86□□□□□ -1.63
SRGAP2C-205ENST00000617209 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
SRGAP2C-205ENST00000617209 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
SRGAP2C-205ENST00000617209 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
SRGAP2C-205ENST00000617209 MT1AP04731 61 aa4.7□□□□□ -1.66
SRGAP2C-205ENST00000617209 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
SRGAP2C-205ENST00000617209 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
SRGAP2C-205ENST00000617209 KRTAP6-1Q3LI64 71 aa4.64□□□□□ -1.67
SRGAP2C-205ENST00000617209 KRTAP5-7Q6L8G8 165 aa4.6□□□□□ -1.67
SRGAP2C-205ENST00000617209 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
SRGAP2C-205ENST00000617209 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
SRGAP2C-205ENST00000617209 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
SRGAP2C-205ENST00000617209 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
SRGAP2C-205ENST00000617209 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
SRGAP2C-205ENST00000617209 MT3P25713 68 aa4.31□□□□□ -1.72
SRGAP2C-205ENST00000617209 OBSCNQ5VST9 7968 aa4.29□□□□□ -1.72
SRGAP2C-205ENST00000617209 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
SRGAP2C-205ENST00000617209 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
SRGAP2C-205ENST00000617209 PRO0628Q9UI54 55 aa4.14□□□□□ -1.75
SRGAP2C-205ENST00000617209 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
SRGAP2C-205ENST00000617209 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
SRGAP2C-205ENST00000617209 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
SRGAP2C-205ENST00000617209 MUC5ACP98088 5654 aa4□□□□□ -1.77
SRGAP2C-205ENST00000617209 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
SRGAP2C-205ENST00000617209 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
SRGAP2C-205ENST00000617209 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
SRGAP2C-205ENST00000617209 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
SRGAP2C-205ENST00000617209 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
SRGAP2C-205ENST00000617209 LCE1CQ5T751 118 aa3.67□□□□□ -1.82
SRGAP2C-205ENST00000617209 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
SRGAP2C-205ENST00000617209 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
SRGAP2C-205ENST00000617209 LUZP6Q538Z0 58 aa3.57□□□□□ -1.84
SRGAP2C-205ENST00000617209 LCE3EQ5T5B0 92 aa3.43□□□□□ -1.86
SRGAP2C-205ENST00000617209 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
SRGAP2C-205ENST00000617209 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
SRGAP2C-205ENST00000617209 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
SRGAP2C-205ENST00000617209 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
SRGAP2C-205ENST00000617209 H3BS24 57 aa3.17□□□□□ -1.9
SRGAP2C-205ENST00000617209 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
SRGAP2C-205ENST00000617209 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
SRGAP2C-205ENST00000617209 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
SRGAP2C-205ENST00000617209 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SRGAP2C-205ENST00000617209 A0A0A0MQY5 61 aa2.7□□□□□ -1.98
SRGAP2C-205ENST00000617209 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
SRGAP2C-205ENST00000617209 PRM1P04553 51 aa2.59□□□□□ -1.99
SRGAP2C-205ENST00000617209 INE1O15225 51 aa2.37□□□□□ -2.03
SRGAP2C-205ENST00000617209 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
SRGAP2C-205ENST00000617209 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 144.3 ms