RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 A0A1B0GU69 56 aa3.55□□□□□ -1.84
TARDBP-218ENST00000617172 MT1GP13640 62 aa3.54□□□□□ -1.84
TARDBP-218ENST00000617172 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
TARDBP-218ENST00000617172 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
TARDBP-218ENST00000617172 CYSTM1Q9H1C7 97 aa3.52□□□□□ -1.85
TARDBP-218ENST00000617172 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
TARDBP-218ENST00000617172 PRO0628Q9UI54 55 aa3.48□□□□□ -1.85
TARDBP-218ENST00000617172 ANAPC13Q9BS18 74 aa3.47□□□□□ -1.85
TARDBP-218ENST00000617172 A8MU10 97 aa3.46□□□□□ -1.86
TARDBP-218ENST00000617172 TNP1P09430 55 aa3.46□□□□□ -1.86
TARDBP-218ENST00000617172 PRR15LQ9BU68 103 aa3.45□□□□□ -1.86
TARDBP-218ENST00000617172 MT1LQ93083 61 aa3.43□□□□□ -1.86
TARDBP-218ENST00000617172 MT1MQ8N339 61 aa3.42□□□□□ -1.86
TARDBP-218ENST00000617172 ATP5EP56381 51 aaPredicted RBP3.41□□□□□ -1.86
TARDBP-218ENST00000617172 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
TARDBP-218ENST00000617172 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
TARDBP-218ENST00000617172 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
TARDBP-218ENST00000617172 CCDC179H3BU77 68 aa3.36□□□□□ -1.87
TARDBP-218ENST00000617172 MT4P47944 62 aa3.34□□□□□ -1.87
TARDBP-218ENST00000617172 UQCR11O14957 56 aa3.33□□□□□ -1.88
TARDBP-218ENST00000617172 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
TARDBP-218ENST00000617172 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
TARDBP-218ENST00000617172 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
TARDBP-218ENST00000617172 KRTAP12-3P60328 96 aa3.31□□□□□ -1.88
TARDBP-218ENST00000617172 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
TARDBP-218ENST00000617172 RPS28P62857 69 aaKnown RBP3.29□□□□□ -1.88
TARDBP-218ENST00000617172 TMEM258P61165 79 aa3.28□□□□□ -1.88
TARDBP-218ENST00000617172 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
TARDBP-218ENST00000617172 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
TARDBP-218ENST00000617172 K7ERS5 55 aa3.22□□□□□ -1.89
TARDBP-218ENST00000617172 MIR22HGQ0VDD5 57 aa3.22□□□□□ -1.89
TARDBP-218ENST00000617172 PSPHP1O15172 72 aa3.18□□□□□ -1.9
TARDBP-218ENST00000617172 KRTAP5-10Q6L8G5 202 aa3.18□□□□□ -1.9
TARDBP-218ENST00000617172 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
TARDBP-218ENST00000617172 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
TARDBP-218ENST00000617172 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
TARDBP-218ENST00000617172 KRTAP20-2Q3LI61 65 aa3.13□□□□□ -1.91
TARDBP-218ENST00000617172 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
TARDBP-218ENST00000617172 BRK1Q8WUW1 75 aa3.12□□□□□ -1.91
TARDBP-218ENST00000617172 PRAC1Q96KF2 57 aa3.12□□□□□ -1.91
TARDBP-218ENST00000617172 Q1T7F1 81 aa3.1□□□□□ -1.91
TARDBP-218ENST00000617172 AHNAK2Q8IVF2 5795 aa3.09□□□□□ -1.91
TARDBP-218ENST00000617172 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
TARDBP-218ENST00000617172 MT3P25713 68 aa3.04□□□□□ -1.92
TARDBP-218ENST00000617172 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
TARDBP-218ENST00000617172 A6NED7 52 aa3.01□□□□□ -1.93
TARDBP-218ENST00000617172 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
TARDBP-218ENST00000617172 SYNE1Q8NF91 8797 aaKnown RBP2.95□□□□□ -1.94
TARDBP-218ENST00000617172 ROMO1P60602 79 aa2.95□□□□□ -1.94
TARDBP-218ENST00000617172 MT1AP04731 61 aa2.93□□□□□ -1.94
TARDBP-218ENST00000617172 LUZP6Q538Z0 58 aa2.93□□□□□ -1.94
TARDBP-218ENST00000617172 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
TARDBP-218ENST00000617172 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
TARDBP-218ENST00000617172 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
TARDBP-218ENST00000617172 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
TARDBP-218ENST00000617172 KRTAP9-6A8MVA2 160 aa2.82□□□□□ -1.96
TARDBP-218ENST00000617172 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
TARDBP-218ENST00000617172 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
TARDBP-218ENST00000617172 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
TARDBP-218ENST00000617172 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
TARDBP-218ENST00000617172 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
TARDBP-218ENST00000617172 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
TARDBP-218ENST00000617172 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
TARDBP-218ENST00000617172 MUC5ACP98088 5654 aa2.58□□□□□ -2
TARDBP-218ENST00000617172 MUC5BQ9HC84 5762 aaPredicted RBP2.57□□□□□ -2
TARDBP-218ENST00000617172 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
TARDBP-218ENST00000617172 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
TARDBP-218ENST00000617172 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
TARDBP-218ENST00000617172 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
TARDBP-218ENST00000617172 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
TARDBP-218ENST00000617172 INE1O15225 51 aa2.22□□□□□ -2.05
TARDBP-218ENST00000617172 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
TARDBP-218ENST00000617172 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
TARDBP-218ENST00000617172 PHGR1C9JFL3 82 aa1.86□□□□□ -2.11
TARDBP-218ENST00000617172 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
TARDBP-218ENST00000617172 PRM1P04553 51 aa1.48□□□□□ -2.17
TARDBP-218ENST00000617172 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
TARDBP-218ENST00000617172 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 11.5 ms