RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 HIVEP1P15822 2718 aa0.54□□□□□ -2.32
HMGB1P24-202ENST00000615653 FASNP49327 2511 aaKnown RBP0.54□□□□□ -2.32
HMGB1P24-202ENST00000615653 STAB1Q9NY15 2570 aa0.54□□□□□ -2.32
HMGB1P24-202ENST00000615653 ACACBO00763 2458 aa0.54□□□□□ -2.32
HMGB1P24-202ENST00000615653 CEP295Q9C0D2 2601 aa0.53□□□□□ -2.32
HMGB1P24-202ENST00000615653 NSD1Q96L73 2696 aaPredicted RBP0.53□□□□□ -2.32
HMGB1P24-202ENST00000615653 DYNC1H1Q14204 4646 aaKnown RBP0.53□□□□□ -2.32
HMGB1P24-202ENST00000615653 FAT1Q14517 4588 aa0.53□□□□□ -2.32
HMGB1P24-202ENST00000615653 PCLOQ9Y6V0 5065 aa0.53□□□□□ -2.32
HMGB1P24-202ENST00000615653 UBR4Q5T4S7 5183 aa0.53□□□□□ -2.33
HMGB1P24-202ENST00000615653 FLNAP21333 2647 aaKnown RBP0.52□□□□□ -2.33
HMGB1P24-202ENST00000615653 IGSF10Q6WRI0 2623 aa0.52□□□□□ -2.33
HMGB1P24-202ENST00000615653 SYNE2Q8WXH0 6885 aaKnown RBP0.52□□□□□ -2.33
HMGB1P24-202ENST00000615653 NEBP20929 6669 aa0.52□□□□□ -2.33
HMGB1P24-202ENST00000615653 STARD9Q9P2P6 4700 aa0.51□□□□□ -2.33
HMGB1P24-202ENST00000615653 SPRR2DP22532 72 aa0.51□□□□□ -2.33
HMGB1P24-202ENST00000615653 KRTAP8-1Q8IUC2 63 aa0.51□□□□□ -2.33
HMGB1P24-202ENST00000615653 LPAP08519 4548 aa0.5□□□□□ -2.33
HMGB1P24-202ENST00000615653 MUC17Q685J3 4493 aa0.5□□□□□ -2.33
HMGB1P24-202ENST00000615653 MAST4O15021 2626 aa0.5□□□□□ -2.33
HMGB1P24-202ENST00000615653 SPRR2BP35325 72 aa0.5□□□□□ -2.33
HMGB1P24-202ENST00000615653 FSIP2Q5CZC0 6907 aa0.5□□□□□ -2.33
HMGB1P24-202ENST00000615653 MGAM2Q2M2H8 2515 aa0.48□□□□□ -2.33
HMGB1P24-202ENST00000615653 FLNBO75369 2602 aaKnown RBP0.48□□□□□ -2.33
HMGB1P24-202ENST00000615653 LRP1BQ9NZR2 4599 aa0.48□□□□□ -2.33
HMGB1P24-202ENST00000615653 SMR3BP02814 79 aaPredicted RBP0.47□□□□□ -2.33
HMGB1P24-202ENST00000615653 HERC1Q15751 4861 aa0.46□□□□□ -2.34
HMGB1P24-202ENST00000615653 MT1AP04731 61 aa0.46□□□□□ -2.34
HMGB1P24-202ENST00000615653 SPRR2AP35326 72 aa0.46□□□□□ -2.34
HMGB1P24-202ENST00000615653 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
HMGB1P24-202ENST00000615653 KRTAP19-5Q3LI72 72 aa0.45□□□□□ -2.34
HMGB1P24-202ENST00000615653 LRP2P98164 4655 aa0.45□□□□□ -2.34
HMGB1P24-202ENST00000615653 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
HMGB1P24-202ENST00000615653 KMT2DO14686 5537 aa0.44□□□□□ -2.34
HMGB1P24-202ENST00000615653 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
HMGB1P24-202ENST00000615653 MUC2Q02817 5179 aa0.43□□□□□ -2.34
HMGB1P24-202ENST00000615653 MDN1Q9NU22 5596 aa0.43□□□□□ -2.34
HMGB1P24-202ENST00000615653 KIAA1109Q2LD37 5005 aa0.41□□□□□ -2.34
HMGB1P24-202ENST00000615653 SPRR2GQ9BYE4 73 aa0.4□□□□□ -2.35
HMGB1P24-202ENST00000615653 SPRR2EP22531 72 aa0.39□□□□□ -2.35
HMGB1P24-202ENST00000615653 KRTAP19-2Q3LHN2 52 aa0.39□□□□□ -2.35
HMGB1P24-202ENST00000615653 KRTAP6-2Q3LI66 62 aa0.39□□□□□ -2.35
HMGB1P24-202ENST00000615653 DNHD1Q96M86 4753 aa0.39□□□□□ -2.35
HMGB1P24-202ENST00000615653 SPRR2FQ96RM1 72 aa0.38□□□□□ -2.35
HMGB1P24-202ENST00000615653 RYR1P21817 5038 aa0.37□□□□□ -2.35
HMGB1P24-202ENST00000615653 MT1EP04732 61 aa0.37□□□□□ -2.35
HMGB1P24-202ENST00000615653 MT1XP80297 61 aa0.37□□□□□ -2.35
HMGB1P24-202ENST00000615653 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
HMGB1P24-202ENST00000615653 KRTAP19-8Q3LI54 63 aa0.36□□□□□ -2.35
HMGB1P24-202ENST00000615653 BIRC6Q9NR09 4857 aa0.36□□□□□ -2.35
HMGB1P24-202ENST00000615653 HYDINQ4G0P3 5121 aa0.35□□□□□ -2.35
HMGB1P24-202ENST00000615653 MT1LQ93083 61 aa0.35□□□□□ -2.35
HMGB1P24-202ENST00000615653 HERC2O95714 4834 aa0.35□□□□□ -2.35
HMGB1P24-202ENST00000615653 RYR3Q15413 4870 aa0.35□□□□□ -2.35
HMGB1P24-202ENST00000615653 KMT2CQ8NEZ4 4911 aaKnown RBP0.35□□□□□ -2.35
HMGB1P24-202ENST00000615653 SSPOA2VEC9 5147 aa0.34□□□□□ -2.35
HMGB1P24-202ENST00000615653 MT1BP07438 61 aa0.33□□□□□ -2.36
HMGB1P24-202ENST00000615653 KRTAP19-7Q3SYF9 63 aa0.33□□□□□ -2.36
HMGB1P24-202ENST00000615653 MT1HP80294 61 aa0.32□□□□□ -2.36
HMGB1P24-202ENST00000615653 RYR2Q92736 4967 aa0.31□□□□□ -2.36
HMGB1P24-202ENST00000615653 RNF213Q63HN8 5207 aa0.3□□□□□ -2.36
HMGB1P24-202ENST00000615653 MT1HL1P0DM35 61 aa0.3□□□□□ -2.36
HMGB1P24-202ENST00000615653 MT1GP13640 62 aa0.3□□□□□ -2.36
HMGB1P24-202ENST00000615653 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
HMGB1P24-202ENST00000615653 USH2AO75445 5202 aa0.28□□□□□ -2.36
HMGB1P24-202ENST00000615653 MT2AP02795 61 aa0.28□□□□□ -2.36
HMGB1P24-202ENST00000615653 MT1FP04733 61 aa0.28□□□□□ -2.36
HMGB1P24-202ENST00000615653 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
HMGB1P24-202ENST00000615653 MT1MQ8N339 61 aa0.27□□□□□ -2.37
HMGB1P24-202ENST00000615653 EPPK1P58107 5090 aaKnown RBP0.26□□□□□ -2.37
HMGB1P24-202ENST00000615653 ABCA13Q86UQ4 5058 aa0.25□□□□□ -2.37
HMGB1P24-202ENST00000615653 PHGR1C9JFL3 82 aa0.24□□□□□ -2.37
HMGB1P24-202ENST00000615653 MUC12Q9UKN1 5478 aa0.19□□□□□ -2.38
HMGB1P24-202ENST00000615653 KRTAP20-1Q3LI63 56 aa0.19□□□□□ -2.38
HMGB1P24-202ENST00000615653 KRTAP19-6Q3LI70 58 aa0.13□□□□□ -2.39
HMGB1P24-202ENST00000615653 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
HMGB1P24-202ENST00000615653 MT4P47944 62 aa0.08□□□□□ -2.4
Retrieved 77 of 20,778 RNA–protein pairs in 87 ms