RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 SSPOA2VEC9 5147 aa1.4□□□□□ -2.19
CHD9-221ENST00000615216 USH2AO75445 5202 aa1.39□□□□□ -2.19
CHD9-221ENST00000615216 FAT4Q6V0I7 4981 aa1.39□□□□□ -2.19
CHD9-221ENST00000615216 PRM1P04553 51 aa1.38□□□□□ -2.19
CHD9-221ENST00000615216 KRTAP4-7Q9BYR0 210 aa1.38□□□□□ -2.19
CHD9-221ENST00000615216 MT4P47944 62 aa1.35□□□□□ -2.19
CHD9-221ENST00000615216 MT1AP04731 61 aa1.34□□□□□ -2.19
CHD9-221ENST00000615216 KRTAP2-3P0C7H8 128 aa1.34□□□□□ -2.2
CHD9-221ENST00000615216 KRTAP2-4Q9BYR9 128 aa1.34□□□□□ -2.2
CHD9-221ENST00000615216 KRTAP2-1Q9BYU5 128 aa1.34□□□□□ -2.2
CHD9-221ENST00000615216 LOC100996750A0A140TA64 210 aa1.33□□□□□ -2.2
CHD9-221ENST00000615216 LPAP08519 4548 aa1.32□□□□□ -2.2
CHD9-221ENST00000615216 KRTAP9-2Q9BYQ4 174 aa1.31□□□□□ -2.2
CHD9-221ENST00000615216 LCE1DQ5T752 114 aa1.31□□□□□ -2.2
CHD9-221ENST00000615216 KRTAP19-7Q3SYF9 63 aa1.3□□□□□ -2.2
CHD9-221ENST00000615216 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
CHD9-221ENST00000615216 KRTAP4-3Q9BYR4 195 aa1.29□□□□□ -2.2
CHD9-221ENST00000615216 LRP2P98164 4655 aa1.28□□□□□ -2.2
CHD9-221ENST00000615216 MUC2Q02817 5179 aa1.28□□□□□ -2.21
CHD9-221ENST00000615216 LCE1AQ5T7P2 110 aa1.27□□□□□ -2.21
CHD9-221ENST00000615216 LCE2AQ5TA79 106 aaPredicted RBP1.26□□□□□ -2.21
CHD9-221ENST00000615216 OBSCNQ5VST9 7968 aa1.26□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP20-1Q3LI63 56 aa1.26□□□□□ -2.21
CHD9-221ENST00000615216 LCE4AQ5TA78 99 aa1.24□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP9-6A0A140TA67 174 aa1.24□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP9-4Q9BYQ2 154 aa1.24□□□□□ -2.21
CHD9-221ENST00000615216 LCE5AQ5TCM9 118 aa1.23□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP6-2Q3LI66 62 aa1.23□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP6-3Q3LI67 103 aa1.23□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP4-9Q9BYQ8 210 aa1.22□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
CHD9-221ENST00000615216 KRTAP9-6A8MVA2 160 aa1.18□□□□□ -2.22
CHD9-221ENST00000615216 KRTAP9-7A8MTY7 169 aa1.16□□□□□ -2.22
CHD9-221ENST00000615216 KRTAP2-2Q9BYT5 123 aa1.15□□□□□ -2.23
CHD9-221ENST00000615216 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.14□□□□□ -2.23
CHD9-221ENST00000615216 LCE1CQ5T751 118 aa1.13□□□□□ -2.23
CHD9-221ENST00000615216 LCE1EQ5T753 118 aa1.13□□□□□ -2.23
CHD9-221ENST00000615216 LCE1FQ5T754 118 aa1.13□□□□□ -2.23
CHD9-221ENST00000615216 MDN1Q9NU22 5596 aa1.08□□□□□ -2.24
CHD9-221ENST00000615216 KRTAP9-9Q9BYP9 154 aa1.08□□□□□ -2.24
CHD9-221ENST00000615216 KMT2DO14686 5537 aa1.08□□□□□ -2.24
CHD9-221ENST00000615216 KRTAP5-2Q701N4 177 aa1.08□□□□□ -2.24
CHD9-221ENST00000615216 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
CHD9-221ENST00000615216 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
CHD9-221ENST00000615216 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
CHD9-221ENST00000615216 SYNE2Q8WXH0 6885 aaKnown RBP1.05□□□□□ -2.24
CHD9-221ENST00000615216 KRTAP5-9P26371 169 aa1.04□□□□□ -2.24
CHD9-221ENST00000615216 MUC5BQ9HC84 5762 aaPredicted RBP1.03□□□□□ -2.24
CHD9-221ENST00000615216 DSTQ03001 7570 aaKnown RBP1.03□□□□□ -2.25
CHD9-221ENST00000615216 KRTAP20-2Q3LI61 65 aa0.99□□□□□ -2.25
CHD9-221ENST00000615216 KRTAP4-11Q9BYQ6 195 aa0.98□□□□□ -2.25
CHD9-221ENST00000615216 KRTAP5-4Q6L8H1 288 aa0.97□□□□□ -2.25
CHD9-221ENST00000615216 NEBP20929 6669 aa0.96□□□□□ -2.26
CHD9-221ENST00000615216 KRTAP4-6Q9BYQ5 205 aa0.95□□□□□ -2.26
CHD9-221ENST00000615216 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
CHD9-221ENST00000615216 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
CHD9-221ENST00000615216 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
CHD9-221ENST00000615216 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
CHD9-221ENST00000615216 FSIP2Q5CZC0 6907 aa0.93□□□□□ -2.26
CHD9-221ENST00000615216 KRTAP5-5Q701N2 237 aaPredicted RBP0.91□□□□□ -2.26
CHD9-221ENST00000615216 KRTAP4-4Q9BYR3 166 aa0.87□□□□□ -2.27
CHD9-221ENST00000615216 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
CHD9-221ENST00000615216 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.84□□□□□ -2.27
CHD9-221ENST00000615216 KRTAP4-12Q9BQ66 201 aa0.84□□□□□ -2.27
CHD9-221ENST00000615216 KRTAP4-2Q9BYR5 136 aa0.84□□□□□ -2.27
CHD9-221ENST00000615216 GPR98Q8WXG9 6306 aa0.83□□□□□ -2.28
CHD9-221ENST00000615216 KRTAP5-3Q6L8H2 238 aa0.83□□□□□ -2.28
CHD9-221ENST00000615216 KRTAP5-8O75690 187 aa0.82□□□□□ -2.28
CHD9-221ENST00000615216 HMCN1Q96RW7 5635 aa0.81□□□□□ -2.28
CHD9-221ENST00000615216 KRTAP5-10Q6L8G5 202 aa0.73□□□□□ -2.29
CHD9-221ENST00000615216 KRTAP5-7Q6L8G8 165 aa0.73□□□□□ -2.29
CHD9-221ENST00000615216 KRTAP5-1Q6L8H4 278 aa0.72□□□□□ -2.29
CHD9-221ENST00000615216 KRTAP5-11Q6L8G4 156 aa0.69□□□□□ -2.3
CHD9-221ENST00000615216 PHGR1C9JFL3 82 aa0.66□□□□□ -2.3
CHD9-221ENST00000615216 KRTAP21-2Q3LI59 83 aa0.61□□□□□ -2.31
CHD9-221ENST00000615216 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
CHD9-221ENST00000615216 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
Retrieved 77 of 20,778 RNA–protein pairs in 8.6 ms