RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ATP5EP56381 51 aaPredicted RBP8.08□□□□□ -1.12
FAM228B-208ENST00000613899 MT1MQ8N339 61 aa8.08□□□□□ -1.12
FAM228B-208ENST00000613899 MT1LQ93083 61 aa8.08□□□□□ -1.12
FAM228B-208ENST00000613899 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
FAM228B-208ENST00000613899 C10orf95Q9H7T3 257 aa8.05□□□□□ -1.12
FAM228B-208ENST00000613899 CCDC179H3BU77 68 aa8.04□□□□□ -1.12
FAM228B-208ENST00000613899 GPR98Q8WXG9 6306 aa7.97□□□□□ -1.13
FAM228B-208ENST00000613899 KRTAP4-2Q9BYR5 136 aa7.97□□□□□ -1.13
FAM228B-208ENST00000613899 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
FAM228B-208ENST00000613899 KRTAP4-11Q9BYQ6 195 aa7.89□□□□□ -1.15
FAM228B-208ENST00000613899 MT4P47944 62 aa7.85□□□□□ -1.15
FAM228B-208ENST00000613899 KRTAP4-3Q9BYR4 195 aa7.85□□□□□ -1.15
FAM228B-208ENST00000613899 HMCN1Q96RW7 5635 aa7.82□□□□□ -1.16
FAM228B-208ENST00000613899 UQCR11O14957 56 aa7.8□□□□□ -1.16
FAM228B-208ENST00000613899 TMEM258P61165 79 aa7.78□□□□□ -1.16
FAM228B-208ENST00000613899 KRTAP12-3P60328 96 aa7.77□□□□□ -1.17
FAM228B-208ENST00000613899 KRTAP5-4Q6L8H1 288 aa7.77□□□□□ -1.17
FAM228B-208ENST00000613899 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
FAM228B-208ENST00000613899 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
FAM228B-208ENST00000613899 AHNAK2Q8IVF2 5795 aa7.55□□□□□ -1.2
FAM228B-208ENST00000613899 K7ERS5 55 aa7.53□□□□□ -1.2
FAM228B-208ENST00000613899 KRTAP5-10Q6L8G5 202 aa7.45□□□□□ -1.22
FAM228B-208ENST00000613899 KRTAP5-5Q701N2 237 aaPredicted RBP7.42□□□□□ -1.22
FAM228B-208ENST00000613899 V9GYY9 64 aa7.41□□□□□ -1.22
FAM228B-208ENST00000613899 PSPHP1O15172 72 aa7.36□□□□□ -1.23
FAM228B-208ENST00000613899 KRTAP20-2Q3LI61 65 aa7.34□□□□□ -1.23
FAM228B-208ENST00000613899 SPRR5A0A1B0GTR4 108 aa7.32□□□□□ -1.24
FAM228B-208ENST00000613899 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
FAM228B-208ENST00000613899 Q1T7F1 81 aa7.31□□□□□ -1.24
FAM228B-208ENST00000613899 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
FAM228B-208ENST00000613899 KRTAP5-3Q6L8H2 238 aa7.26□□□□□ -1.25
FAM228B-208ENST00000613899 KRTAP15-1Q3LI76 137 aa7.22□□□□□ -1.25
FAM228B-208ENST00000613899 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
FAM228B-208ENST00000613899 A6NED7 52 aa7.13□□□□□ -1.27
FAM228B-208ENST00000613899 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
FAM228B-208ENST00000613899 CDC42SE1Q9NRR8 79 aa7.1□□□□□ -1.27
FAM228B-208ENST00000613899 SYNE1Q8NF91 8797 aaKnown RBP7.09□□□□□ -1.27
FAM228B-208ENST00000613899 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
FAM228B-208ENST00000613899 ROMO1P60602 79 aa6.95□□□□□ -1.3
FAM228B-208ENST00000613899 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.3
FAM228B-208ENST00000613899 MT1AP04731 61 aa6.89□□□□□ -1.31
FAM228B-208ENST00000613899 KRTAP6-1Q3LI64 71 aa6.83□□□□□ -1.32
FAM228B-208ENST00000613899 KRTAP5-2Q701N4 177 aa6.79□□□□□ -1.32
FAM228B-208ENST00000613899 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
FAM228B-208ENST00000613899 KRTAP6-2Q3LI66 62 aa6.55□□□□□ -1.36
FAM228B-208ENST00000613899 PCP4P48539 62 aa6.5□□□□□ -1.37
FAM228B-208ENST00000613899 KRTAP5-8O75690 187 aa6.49□□□□□ -1.37
FAM228B-208ENST00000613899 OBSCNQ5VST9 7968 aa6.33□□□□□ -1.4
FAM228B-208ENST00000613899 MT3P25713 68 aa6.32□□□□□ -1.4
FAM228B-208ENST00000613899 MUC5BQ9HC84 5762 aaPredicted RBP6.24□□□□□ -1.41
FAM228B-208ENST00000613899 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
FAM228B-208ENST00000613899 AHNAKQ09666 5890 aaKnown RBP6.2□□□□□ -1.42
FAM228B-208ENST00000613899 KRTAP5-1Q6L8H4 278 aa6.1□□□□□ -1.43
FAM228B-208ENST00000613899 BRK1Q8WUW1 75 aa5.94□□□□□ -1.46
FAM228B-208ENST00000613899 LCE1EQ5T753 118 aa5.82□□□□□ -1.48
FAM228B-208ENST00000613899 A0A0A0MQY5 61 aa5.69□□□□□ -1.5
FAM228B-208ENST00000613899 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
FAM228B-208ENST00000613899 LCE1BQ5T7P3 118 aa5.47□□□□□ -1.53
FAM228B-208ENST00000613899 LCE1CQ5T751 118 aa5.41□□□□□ -1.54
FAM228B-208ENST00000613899 PRAC1Q96KF2 57 aa5.39□□□□□ -1.55
FAM228B-208ENST00000613899 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.34□□□□□ -1.55
FAM228B-208ENST00000613899 KRTAP5-11Q6L8G4 156 aa5.3□□□□□ -1.56
FAM228B-208ENST00000613899 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
FAM228B-208ENST00000613899 PRO0628Q9UI54 55 aa4.97□□□□□ -1.61
FAM228B-208ENST00000613899 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
FAM228B-208ENST00000613899 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
FAM228B-208ENST00000613899 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
FAM228B-208ENST00000613899 LUZP6Q538Z0 58 aa4.65□□□□□ -1.67
FAM228B-208ENST00000613899 KRTAP21-2Q3LI59 83 aa4.5□□□□□ -1.69
FAM228B-208ENST00000613899 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
FAM228B-208ENST00000613899 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
FAM228B-208ENST00000613899 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
FAM228B-208ENST00000613899 MUC19Q7Z5P9 8384 aa3.9□□□□□ -1.79
FAM228B-208ENST00000613899 PRM1P04553 51 aa3.53□□□□□ -1.84
FAM228B-208ENST00000613899 KRTAP21-1Q3LI58 79 aa3.32□□□□□ -1.88
FAM228B-208ENST00000613899 MUC16Q8WXI7 14507 aa2.83□□□□□ -1.96
FAM228B-208ENST00000613899 INE1O15225 51 aa2.75□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 61.7 ms