RNA–Protein interactions for RNA: ENST00000613347.1

NEAT1_3.1-201, humanhuman

BASIC

Gene NEAT1_3, Length 159 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1_3.1-201ENST00000613347 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
NEAT1_3.1-201ENST00000613347 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
NEAT1_3.1-201ENST00000613347 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
NEAT1_3.1-201ENST00000613347 K7ERS5 55 aa3.96□□□□□ -1.78
NEAT1_3.1-201ENST00000613347 MT1LQ93083 61 aa3.95□□□□□ -1.78
NEAT1_3.1-201ENST00000613347 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
NEAT1_3.1-201ENST00000613347 MT1MQ8N339 61 aa3.93□□□□□ -1.78
NEAT1_3.1-201ENST00000613347 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
NEAT1_3.1-201ENST00000613347 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
NEAT1_3.1-201ENST00000613347 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
NEAT1_3.1-201ENST00000613347 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
NEAT1_3.1-201ENST00000613347 BRK1Q8WUW1 75 aa3.82□□□□□ -1.8
NEAT1_3.1-201ENST00000613347 ROMO1P60602 79 aa3.8□□□□□ -1.8
NEAT1_3.1-201ENST00000613347 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
NEAT1_3.1-201ENST00000613347 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
NEAT1_3.1-201ENST00000613347 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
NEAT1_3.1-201ENST00000613347 KRTAP19-4Q3LI73 84 aa3.76□□□□□ -1.81
NEAT1_3.1-201ENST00000613347 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
NEAT1_3.1-201ENST00000613347 MT4P47944 62 aa3.73□□□□□ -1.81
NEAT1_3.1-201ENST00000613347 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
NEAT1_3.1-201ENST00000613347 HMCN1Q96RW7 5635 aa3.66□□□□□ -1.82
NEAT1_3.1-201ENST00000613347 GPR98Q8WXG9 6306 aa3.65□□□□□ -1.83
NEAT1_3.1-201ENST00000613347 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
NEAT1_3.1-201ENST00000613347 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
NEAT1_3.1-201ENST00000613347 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
NEAT1_3.1-201ENST00000613347 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
NEAT1_3.1-201ENST00000613347 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
NEAT1_3.1-201ENST00000613347 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
NEAT1_3.1-201ENST00000613347 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
NEAT1_3.1-201ENST00000613347 LOC100996750A0A140TA64 210 aa3.53□□□□□ -1.84
NEAT1_3.1-201ENST00000613347 KRTAP20-2Q3LI61 65 aa3.52□□□□□ -1.85
NEAT1_3.1-201ENST00000613347 AHNAK2Q8IVF2 5795 aa3.5□□□□□ -1.85
NEAT1_3.1-201ENST00000613347 KRTAP5-10Q6L8G5 202 aa3.5□□□□□ -1.85
NEAT1_3.1-201ENST00000613347 PRO0628Q9UI54 55 aa3.5□□□□□ -1.85
NEAT1_3.1-201ENST00000613347 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
NEAT1_3.1-201ENST00000613347 KRTAP5-3Q6L8H2 238 aa3.43□□□□□ -1.86
NEAT1_3.1-201ENST00000613347 SYNE1Q8NF91 8797 aaKnown RBP3.42□□□□□ -1.86
NEAT1_3.1-201ENST00000613347 MT1AP04731 61 aa3.38□□□□□ -1.87
NEAT1_3.1-201ENST00000613347 KRTAP5-7Q6L8G8 165 aa3.38□□□□□ -1.87
NEAT1_3.1-201ENST00000613347 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
NEAT1_3.1-201ENST00000613347 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
NEAT1_3.1-201ENST00000613347 KTN1-AS1Q86SY8 53 aa3.3□□□□□ -1.88
NEAT1_3.1-201ENST00000613347 KRTAP5-2Q701N4 177 aa3.28□□□□□ -1.88
NEAT1_3.1-201ENST00000613347 KRTAP9-4Q9BYQ2 154 aa3.28□□□□□ -1.88
NEAT1_3.1-201ENST00000613347 KRTAP4-11Q9BYQ6 195 aa3.22□□□□□ -1.89
NEAT1_3.1-201ENST00000613347 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
NEAT1_3.1-201ENST00000613347 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
NEAT1_3.1-201ENST00000613347 MT3P25713 68 aa3.11□□□□□ -1.91
NEAT1_3.1-201ENST00000613347 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
NEAT1_3.1-201ENST00000613347 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
NEAT1_3.1-201ENST00000613347 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
NEAT1_3.1-201ENST00000613347 KRTAP5-1Q6L8H4 278 aa2.93□□□□□ -1.94
NEAT1_3.1-201ENST00000613347 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
NEAT1_3.1-201ENST00000613347 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
NEAT1_3.1-201ENST00000613347 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
NEAT1_3.1-201ENST00000613347 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
NEAT1_3.1-201ENST00000613347 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
NEAT1_3.1-201ENST00000613347 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
NEAT1_3.1-201ENST00000613347 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
NEAT1_3.1-201ENST00000613347 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.99
NEAT1_3.1-201ENST00000613347 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
NEAT1_3.1-201ENST00000613347 NDUFAF8A1L188 74 aa2.54□□□□□ -2
NEAT1_3.1-201ENST00000613347 LCE3EQ5T5B0 92 aa2.45□□□□□ -2.02
NEAT1_3.1-201ENST00000613347 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.42□□□□□ -2.02
NEAT1_3.1-201ENST00000613347 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
NEAT1_3.1-201ENST00000613347 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
NEAT1_3.1-201ENST00000613347 LCE1FQ5T754 118 aa2.35□□□□□ -2.03
NEAT1_3.1-201ENST00000613347 KRTAP21-2Q3LI59 83 aa2.21□□□□□ -2.06
NEAT1_3.1-201ENST00000613347 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
NEAT1_3.1-201ENST00000613347 A0A0A0MQY5 61 aa2.03□□□□□ -2.08
NEAT1_3.1-201ENST00000613347 PRM1P04553 51 aa2.01□□□□□ -2.09
NEAT1_3.1-201ENST00000613347 INE1O15225 51 aa1.98□□□□□ -2.09
NEAT1_3.1-201ENST00000613347 KRTAP4-4Q9BYR3 166 aa1.97□□□□□ -2.09
NEAT1_3.1-201ENST00000613347 H3BS24 57 aa1.89□□□□□ -2.11
NEAT1_3.1-201ENST00000613347 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
NEAT1_3.1-201ENST00000613347 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
NEAT1_3.1-201ENST00000613347 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 48.9 ms