RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 A0A1B0GU69 56 aa6.43□□□□□ -1.38
SSBP1-215ENST00000612337 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
SSBP1-215ENST00000612337 SMIM26A0A096LP01 95 aa6.38□□□□□ -1.39
SSBP1-215ENST00000612337 CCDC179H3BU77 68 aa6.37□□□□□ -1.39
SSBP1-215ENST00000612337 MT1MQ8N339 61 aa6.34□□□□□ -1.39
SSBP1-215ENST00000612337 A8MU10 97 aa6.32□□□□□ -1.4
SSBP1-215ENST00000612337 MT4P47944 62 aa6.3□□□□□ -1.4
SSBP1-215ENST00000612337 MT1LQ93083 61 aa6.3□□□□□ -1.4
SSBP1-215ENST00000612337 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
SSBP1-215ENST00000612337 AHNAK2Q8IVF2 5795 aa6.28□□□□□ -1.4
SSBP1-215ENST00000612337 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
SSBP1-215ENST00000612337 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
SSBP1-215ENST00000612337 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
SSBP1-215ENST00000612337 KRTAP5-4Q6L8H1 288 aa6.19□□□□□ -1.42
SSBP1-215ENST00000612337 C10orf95Q9H7T3 257 aa6.19□□□□□ -1.42
SSBP1-215ENST00000612337 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
SSBP1-215ENST00000612337 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
SSBP1-215ENST00000612337 TNP1P09430 55 aa6.15□□□□□ -1.42
SSBP1-215ENST00000612337 TMEM258P61165 79 aa6.12□□□□□ -1.43
SSBP1-215ENST00000612337 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
SSBP1-215ENST00000612337 UQCR11O14957 56 aa6.04□□□□□ -1.44
SSBP1-215ENST00000612337 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
SSBP1-215ENST00000612337 MIR22HGQ0VDD5 57 aa5.9□□□□□ -1.46
SSBP1-215ENST00000612337 KRTAP5-7Q6L8G8 165 aa5.89□□□□□ -1.47
SSBP1-215ENST00000612337 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
SSBP1-215ENST00000612337 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
SSBP1-215ENST00000612337 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
SSBP1-215ENST00000612337 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
SSBP1-215ENST00000612337 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
SSBP1-215ENST00000612337 V9GYY9 64 aa5.81□□□□□ -1.48
SSBP1-215ENST00000612337 K7ERS5 55 aa5.79□□□□□ -1.48
SSBP1-215ENST00000612337 PSPHP1O15172 72 aa5.78□□□□□ -1.48
SSBP1-215ENST00000612337 Q1T7F1 81 aa5.77□□□□□ -1.49
SSBP1-215ENST00000612337 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
SSBP1-215ENST00000612337 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
SSBP1-215ENST00000612337 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
SSBP1-215ENST00000612337 PCP4P48539 62 aa5.65□□□□□ -1.5
SSBP1-215ENST00000612337 A6NED7 52 aa5.58□□□□□ -1.52
SSBP1-215ENST00000612337 CDC42SE1Q9NRR8 79 aa5.48□□□□□ -1.53
SSBP1-215ENST00000612337 RPS28P62857 69 aaKnown RBP5.46□□□□□ -1.54
SSBP1-215ENST00000612337 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
SSBP1-215ENST00000612337 ROMO1P60602 79 aa5.4□□□□□ -1.54
SSBP1-215ENST00000612337 KRTAP5-2Q701N4 177 aa5.39□□□□□ -1.55
SSBP1-215ENST00000612337 MT1AP04731 61 aa5.36□□□□□ -1.55
SSBP1-215ENST00000612337 KRTAP6-1Q3LI64 71 aa5.34□□□□□ -1.55
SSBP1-215ENST00000612337 AHNAKQ09666 5890 aaKnown RBP5.24□□□□□ -1.57
SSBP1-215ENST00000612337 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
SSBP1-215ENST00000612337 KRTAP5-8O75690 187 aa5.23□□□□□ -1.57
SSBP1-215ENST00000612337 MUC5ACP98088 5654 aa5.18□□□□□ -1.58
SSBP1-215ENST00000612337 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
SSBP1-215ENST00000612337 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
SSBP1-215ENST00000612337 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
SSBP1-215ENST00000612337 MT3P25713 68 aa5.03□□□□□ -1.6
SSBP1-215ENST00000612337 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
SSBP1-215ENST00000612337 KRTAP5-1Q6L8H4 278 aa4.87□□□□□ -1.63
SSBP1-215ENST00000612337 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
SSBP1-215ENST00000612337 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
SSBP1-215ENST00000612337 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SSBP1-215ENST00000612337 PRAC1Q96KF2 57 aa4.7□□□□□ -1.66
SSBP1-215ENST00000612337 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.69□□□□□ -1.66
SSBP1-215ENST00000612337 NDUFAF8A1L188 74 aa4.5□□□□□ -1.69
SSBP1-215ENST00000612337 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
SSBP1-215ENST00000612337 PRO0628Q9UI54 55 aa4.33□□□□□ -1.72
SSBP1-215ENST00000612337 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
SSBP1-215ENST00000612337 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
SSBP1-215ENST00000612337 LCE3EQ5T5B0 92 aa4.17□□□□□ -1.74
SSBP1-215ENST00000612337 KTN1-AS1Q86SY8 53 aa4.03□□□□□ -1.76
SSBP1-215ENST00000612337 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
SSBP1-215ENST00000612337 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SSBP1-215ENST00000612337 LUZP6Q538Z0 58 aa3.65□□□□□ -1.83
SSBP1-215ENST00000612337 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
SSBP1-215ENST00000612337 KRTAP21-2Q3LI59 83 aa3.53□□□□□ -1.84
SSBP1-215ENST00000612337 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
SSBP1-215ENST00000612337 PRM1P04553 51 aa2.76□□□□□ -1.97
SSBP1-215ENST00000612337 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
SSBP1-215ENST00000612337 INE1O15225 51 aa2.54□□□□□ -2
SSBP1-215ENST00000612337 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms