RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 A8MU10 97 aa5.59□□□□□ -1.51
LMBR1-220ENST00000609081 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
LMBR1-220ENST00000609081 PCP4P48539 62 aa5.58□□□□□ -1.52
LMBR1-220ENST00000609081 LINC01558Q9Y6Z2 57 aa5.57□□□□□ -1.52
LMBR1-220ENST00000609081 TMEM258P61165 79 aa5.56□□□□□ -1.52
LMBR1-220ENST00000609081 TNP1P09430 55 aa5.53□□□□□ -1.52
LMBR1-220ENST00000609081 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
LMBR1-220ENST00000609081 DSTQ03001 7570 aaKnown RBP5.51□□□□□ -1.53
LMBR1-220ENST00000609081 MT1GP13640 62 aa5.49□□□□□ -1.53
LMBR1-220ENST00000609081 PP632Q6XCG6 107 aa5.48□□□□□ -1.53
LMBR1-220ENST00000609081 UQCR11O14957 56 aa5.47□□□□□ -1.53
LMBR1-220ENST00000609081 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.54
LMBR1-220ENST00000609081 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
LMBR1-220ENST00000609081 MT1LQ93083 61 aa5.37□□□□□ -1.55
LMBR1-220ENST00000609081 MT1MQ8N339 61 aa5.34□□□□□ -1.55
LMBR1-220ENST00000609081 MIR22HGQ0VDD5 57 aa5.31□□□□□ -1.56
LMBR1-220ENST00000609081 V9GYY9 64 aa5.31□□□□□ -1.56
LMBR1-220ENST00000609081 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
LMBR1-220ENST00000609081 K7ERS5 55 aa5.28□□□□□ -1.56
LMBR1-220ENST00000609081 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
LMBR1-220ENST00000609081 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
LMBR1-220ENST00000609081 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
LMBR1-220ENST00000609081 Q1T7F1 81 aa5.22□□□□□ -1.57
LMBR1-220ENST00000609081 PSPHP1O15172 72 aa5.17□□□□□ -1.58
LMBR1-220ENST00000609081 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
LMBR1-220ENST00000609081 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
LMBR1-220ENST00000609081 MT4P47944 62 aa5.08□□□□□ -1.6
LMBR1-220ENST00000609081 HMCN1Q96RW7 5635 aa5.07□□□□□ -1.6
LMBR1-220ENST00000609081 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.06□□□□□ -1.6
LMBR1-220ENST00000609081 A6NED7 52 aa5.04□□□□□ -1.6
LMBR1-220ENST00000609081 RPS28P62857 69 aaKnown RBP4.98□□□□□ -1.61
LMBR1-220ENST00000609081 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.62
LMBR1-220ENST00000609081 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
LMBR1-220ENST00000609081 KRTAP15-1Q3LI76 137 aa4.91□□□□□ -1.62
LMBR1-220ENST00000609081 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
LMBR1-220ENST00000609081 ROMO1P60602 79 aa4.87□□□□□ -1.63
LMBR1-220ENST00000609081 AHNAK2Q8IVF2 5795 aa4.87□□□□□ -1.63
LMBR1-220ENST00000609081 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
LMBR1-220ENST00000609081 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
LMBR1-220ENST00000609081 LCE3CQ5T5A8 94 aa4.83□□□□□ -1.64
LMBR1-220ENST00000609081 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
LMBR1-220ENST00000609081 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
LMBR1-220ENST00000609081 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
LMBR1-220ENST00000609081 KRTAP5-11Q6L8G4 156 aa4.64□□□□□ -1.67
LMBR1-220ENST00000609081 KRTAP5-7Q6L8G8 165 aa4.62□□□□□ -1.67
LMBR1-220ENST00000609081 MT1AP04731 61 aa4.59□□□□□ -1.67
LMBR1-220ENST00000609081 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
LMBR1-220ENST00000609081 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
LMBR1-220ENST00000609081 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
LMBR1-220ENST00000609081 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
LMBR1-220ENST00000609081 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
LMBR1-220ENST00000609081 KRTAP6-2Q3LI66 62 aa4.32□□□□□ -1.72
LMBR1-220ENST00000609081 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
LMBR1-220ENST00000609081 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
LMBR1-220ENST00000609081 OBSCNQ5VST9 7968 aa4.23□□□□□ -1.73
LMBR1-220ENST00000609081 KRTAP5-8O75690 187 aa4.22□□□□□ -1.73
LMBR1-220ENST00000609081 MT3P25713 68 aa4.22□□□□□ -1.73
LMBR1-220ENST00000609081 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
LMBR1-220ENST00000609081 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
LMBR1-220ENST00000609081 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
LMBR1-220ENST00000609081 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
LMBR1-220ENST00000609081 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
LMBR1-220ENST00000609081 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
LMBR1-220ENST00000609081 MUC5BQ9HC84 5762 aaPredicted RBP4□□□□□ -1.77
LMBR1-220ENST00000609081 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
LMBR1-220ENST00000609081 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
LMBR1-220ENST00000609081 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
LMBR1-220ENST00000609081 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
LMBR1-220ENST00000609081 LUZP6Q538Z0 58 aa3.39□□□□□ -1.87
LMBR1-220ENST00000609081 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
LMBR1-220ENST00000609081 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
LMBR1-220ENST00000609081 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
LMBR1-220ENST00000609081 INE1O15225 51 aa2.81□□□□□ -1.96
LMBR1-220ENST00000609081 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
LMBR1-220ENST00000609081 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
LMBR1-220ENST00000609081 PRM1P04553 51 aa2.45□□□□□ -2.02
LMBR1-220ENST00000609081 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
LMBR1-220ENST00000609081 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 122.5 ms