RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
HDDC2-203ENST00000608284 H7BZZ5 65 aa5.47□□□□□ -1.53
HDDC2-203ENST00000608284 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
HDDC2-203ENST00000608284 SPATA8Q6RVD6 105 aa5.45□□□□□ -1.54
HDDC2-203ENST00000608284 TMEM258P61165 79 aa5.43□□□□□ -1.54
HDDC2-203ENST00000608284 A0A1B0GU33 70 aa5.42□□□□□ -1.54
HDDC2-203ENST00000608284 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
HDDC2-203ENST00000608284 KRTAP12-1P59990 96 aa5.39□□□□□ -1.55
HDDC2-203ENST00000608284 SPRR5A0A1B0GTR4 108 aa5.38□□□□□ -1.55
HDDC2-203ENST00000608284 KRTAP4-11Q9BYQ6 195 aa5.38□□□□□ -1.55
HDDC2-203ENST00000608284 TNP1P09430 55 aa5.37□□□□□ -1.55
HDDC2-203ENST00000608284 ATP5EP56381 51 aaPredicted RBP5.36□□□□□ -1.55
HDDC2-203ENST00000608284 LCE3AQ5TA76 89 aa5.36□□□□□ -1.55
HDDC2-203ENST00000608284 COA5Q86WW8 74 aa5.35□□□□□ -1.55
HDDC2-203ENST00000608284 SMIM26A0A096LP01 95 aa5.32□□□□□ -1.56
HDDC2-203ENST00000608284 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
HDDC2-203ENST00000608284 KRTAP12-4P60329 112 aa5.29□□□□□ -1.56
HDDC2-203ENST00000608284 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
HDDC2-203ENST00000608284 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
HDDC2-203ENST00000608284 RPS28P62857 69 aaKnown RBP5.21□□□□□ -1.58
HDDC2-203ENST00000608284 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
HDDC2-203ENST00000608284 A0A1B0GU69 56 aa5.16□□□□□ -1.58
HDDC2-203ENST00000608284 A8MU10 97 aa5.15□□□□□ -1.59
HDDC2-203ENST00000608284 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.59
HDDC2-203ENST00000608284 H3BS24 57 aa5.11□□□□□ -1.59
HDDC2-203ENST00000608284 Q1T7F1 81 aa5.02□□□□□ -1.61
HDDC2-203ENST00000608284 V9GYY9 64 aa5.02□□□□□ -1.61
HDDC2-203ENST00000608284 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
HDDC2-203ENST00000608284 LINC01558Q9Y6Z2 57 aa5□□□□□ -1.61
HDDC2-203ENST00000608284 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
HDDC2-203ENST00000608284 PSPHP1O15172 72 aa4.97□□□□□ -1.61
HDDC2-203ENST00000608284 AHNAKQ09666 5890 aaKnown RBP4.95□□□□□ -1.62
HDDC2-203ENST00000608284 MUC5BQ9HC84 5762 aaPredicted RBP4.86□□□□□ -1.63
HDDC2-203ENST00000608284 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
HDDC2-203ENST00000608284 KRTAP25-1Q3LHN0 102 aa4.84□□□□□ -1.63
HDDC2-203ENST00000608284 A6NED7 52 aa4.83□□□□□ -1.64
HDDC2-203ENST00000608284 KRTAP5-2Q701N4 177 aa4.8□□□□□ -1.64
HDDC2-203ENST00000608284 UQCR11O14957 56 aa4.79□□□□□ -1.64
HDDC2-203ENST00000608284 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
HDDC2-203ENST00000608284 MT1AP04731 61 aa4.74□□□□□ -1.65
HDDC2-203ENST00000608284 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
HDDC2-203ENST00000608284 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
HDDC2-203ENST00000608284 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
HDDC2-203ENST00000608284 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
HDDC2-203ENST00000608284 KRTAP6-1Q3LI64 71 aa4.71□□□□□ -1.66
HDDC2-203ENST00000608284 CDC42SE1Q9NRR8 79 aa4.69□□□□□ -1.66
HDDC2-203ENST00000608284 K7ERS5 55 aa4.67□□□□□ -1.66
HDDC2-203ENST00000608284 KRTAP23-1A1A580 65 aa4.62□□□□□ -1.67
HDDC2-203ENST00000608284 KRTAP6-2Q3LI66 62 aa4.61□□□□□ -1.67
HDDC2-203ENST00000608284 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
HDDC2-203ENST00000608284 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
HDDC2-203ENST00000608284 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
HDDC2-203ENST00000608284 MT3P25713 68 aa4.42□□□□□ -1.7
HDDC2-203ENST00000608284 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
HDDC2-203ENST00000608284 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
HDDC2-203ENST00000608284 ROMO1P60602 79 aa4.35□□□□□ -1.71
HDDC2-203ENST00000608284 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
HDDC2-203ENST00000608284 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
HDDC2-203ENST00000608284 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
HDDC2-203ENST00000608284 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
HDDC2-203ENST00000608284 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
HDDC2-203ENST00000608284 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
HDDC2-203ENST00000608284 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
HDDC2-203ENST00000608284 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
HDDC2-203ENST00000608284 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
HDDC2-203ENST00000608284 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
HDDC2-203ENST00000608284 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
HDDC2-203ENST00000608284 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
HDDC2-203ENST00000608284 NDUFAF8A1L188 74 aa3.32□□□□□ -1.88
HDDC2-203ENST00000608284 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
HDDC2-203ENST00000608284 KRTAP21-2Q3LI59 83 aa3.09□□□□□ -1.91
HDDC2-203ENST00000608284 KRTAP4-4Q9BYR3 166 aa3.09□□□□□ -1.91
HDDC2-203ENST00000608284 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
HDDC2-203ENST00000608284 INE1O15225 51 aa2.72□□□□□ -1.97
HDDC2-203ENST00000608284 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
HDDC2-203ENST00000608284 PRM1P04553 51 aa2.27□□□□□ -2.05
HDDC2-203ENST00000608284 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 110.4 ms