RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 MT1GP13640 62 aa5.5□□□□□ -1.53
SSBP4-214ENST00000607020 V9GYY9 64 aa5.49□□□□□ -1.53
SSBP4-214ENST00000607020 Q1T7F1 81 aa5.47□□□□□ -1.53
SSBP4-214ENST00000607020 KRTAP5-7Q6L8G8 165 aa5.46□□□□□ -1.54
SSBP4-214ENST00000607020 KRTAP5-4Q6L8H1 288 aa5.46□□□□□ -1.54
SSBP4-214ENST00000607020 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
SSBP4-214ENST00000607020 PSPHP1O15172 72 aa5.42□□□□□ -1.54
SSBP4-214ENST00000607020 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
SSBP4-214ENST00000607020 MIR22HGQ0VDD5 57 aa5.39□□□□□ -1.55
SSBP4-214ENST00000607020 KRTAP4-6Q9BYQ5 205 aa5.39□□□□□ -1.55
SSBP4-214ENST00000607020 MT1MQ8N339 61 aa5.37□□□□□ -1.55
SSBP4-214ENST00000607020 KRTAP5-3Q6L8H2 238 aa5.35□□□□□ -1.55
SSBP4-214ENST00000607020 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
SSBP4-214ENST00000607020 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
SSBP4-214ENST00000607020 MT1LQ93083 61 aa5.28□□□□□ -1.56
SSBP4-214ENST00000607020 A6NED7 52 aa5.26□□□□□ -1.57
SSBP4-214ENST00000607020 TNP1P09430 55 aa5.25□□□□□ -1.57
SSBP4-214ENST00000607020 K7ERS5 55 aa5.24□□□□□ -1.57
SSBP4-214ENST00000607020 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
SSBP4-214ENST00000607020 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
SSBP4-214ENST00000607020 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
SSBP4-214ENST00000607020 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
SSBP4-214ENST00000607020 KRTAP25-1Q3LHN0 102 aa5.09□□□□□ -1.59
SSBP4-214ENST00000607020 CDC42SE1Q9NRR8 79 aa5.07□□□□□ -1.6
SSBP4-214ENST00000607020 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
SSBP4-214ENST00000607020 KRTAP12-4P60329 112 aa4.98□□□□□ -1.61
SSBP4-214ENST00000607020 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
SSBP4-214ENST00000607020 KRTAP12-3P60328 96 aa4.95□□□□□ -1.62
SSBP4-214ENST00000607020 ROMO1P60602 79 aa4.94□□□□□ -1.62
SSBP4-214ENST00000607020 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
SSBP4-214ENST00000607020 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
SSBP4-214ENST00000607020 KRTAP4-11Q9BYQ6 195 aa4.83□□□□□ -1.64
SSBP4-214ENST00000607020 AHNAKQ09666 5890 aaKnown RBP4.83□□□□□ -1.64
SSBP4-214ENST00000607020 MUC5ACP98088 5654 aa4.79□□□□□ -1.64
SSBP4-214ENST00000607020 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
SSBP4-214ENST00000607020 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
SSBP4-214ENST00000607020 LOC100996750A0A140TA64 210 aa4.72□□□□□ -1.65
SSBP4-214ENST00000607020 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
SSBP4-214ENST00000607020 KRTAP19-4Q3LI73 84 aa4.69□□□□□ -1.66
SSBP4-214ENST00000607020 KRTAP5-8O75690 187 aa4.68□□□□□ -1.66
SSBP4-214ENST00000607020 KRTAP5-2Q701N4 177 aa4.68□□□□□ -1.66
SSBP4-214ENST00000607020 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
SSBP4-214ENST00000607020 KRTAP9-9Q9BYP9 154 aa4.51□□□□□ -1.69
SSBP4-214ENST00000607020 PMAIP1Q13794 54 aa4.5□□□□□ -1.69
SSBP4-214ENST00000607020 MT1AP04731 61 aa4.49□□□□□ -1.69
SSBP4-214ENST00000607020 OBSCNQ5VST9 7968 aa4.48□□□□□ -1.69
SSBP4-214ENST00000607020 KRTAP6-1Q3LI64 71 aa4.47□□□□□ -1.69
SSBP4-214ENST00000607020 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
SSBP4-214ENST00000607020 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
SSBP4-214ENST00000607020 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
SSBP4-214ENST00000607020 KRTAP9-6A8MVA2 160 aa4.33□□□□□ -1.72
SSBP4-214ENST00000607020 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
SSBP4-214ENST00000607020 PRAC1Q96KF2 57 aa4.29□□□□□ -1.72
SSBP4-214ENST00000607020 MT3P25713 68 aa4.14□□□□□ -1.75
SSBP4-214ENST00000607020 KTN1-AS1Q86SY8 53 aa4.14□□□□□ -1.75
SSBP4-214ENST00000607020 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SSBP4-214ENST00000607020 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
SSBP4-214ENST00000607020 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
SSBP4-214ENST00000607020 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
SSBP4-214ENST00000607020 LCE1CQ5T751 118 aa3.66□□□□□ -1.82
SSBP4-214ENST00000607020 LUZP6Q538Z0 58 aa3.58□□□□□ -1.84
SSBP4-214ENST00000607020 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
SSBP4-214ENST00000607020 KRTAP5-11Q6L8G4 156 aa3.43□□□□□ -1.86
SSBP4-214ENST00000607020 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
SSBP4-214ENST00000607020 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
SSBP4-214ENST00000607020 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.28□□□□□ -1.88
SSBP4-214ENST00000607020 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
SSBP4-214ENST00000607020 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
SSBP4-214ENST00000607020 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
SSBP4-214ENST00000607020 KRTAP21-2Q3LI59 83 aa2.97□□□□□ -1.93
SSBP4-214ENST00000607020 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
SSBP4-214ENST00000607020 KRTAP4-4Q9BYR3 166 aa2.74□□□□□ -1.97
SSBP4-214ENST00000607020 A0A0A0MQY5 61 aa2.56□□□□□ -2
SSBP4-214ENST00000607020 PRM1P04553 51 aa2.54□□□□□ -2
SSBP4-214ENST00000607020 INE1O15225 51 aa2.53□□□□□ -2
SSBP4-214ENST00000607020 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SSBP4-214ENST00000607020 MUC16Q8WXI7 14507 aa1.99□□□□□ -2.09
SSBP4-214ENST00000607020 H3BS24 57 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms