RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
TUBE1-211ENST00000605457 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
TUBE1-211ENST00000605457 KRTAP19-7Q3SYF9 63 aa5.34□□□□□ -1.55
TUBE1-211ENST00000605457 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
TUBE1-211ENST00000605457 TNP1P09430 55 aa5.3□□□□□ -1.56
TUBE1-211ENST00000605457 SPRR2DP22532 72 aa5.3□□□□□ -1.56
TUBE1-211ENST00000605457 KRTAP2-3P0C7H8 128 aa5.3□□□□□ -1.56
TUBE1-211ENST00000605457 KRTAP2-4Q9BYR9 128 aa5.3□□□□□ -1.56
TUBE1-211ENST00000605457 MT1EP04732 61 aa5.28□□□□□ -1.56
TUBE1-211ENST00000605457 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
TUBE1-211ENST00000605457 LCE3AQ5TA76 89 aa5.23□□□□□ -1.57
TUBE1-211ENST00000605457 A6NED7 52 aa5.22□□□□□ -1.57
TUBE1-211ENST00000605457 K7ERS5 55 aa5.22□□□□□ -1.57
TUBE1-211ENST00000605457 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
TUBE1-211ENST00000605457 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
TUBE1-211ENST00000605457 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
TUBE1-211ENST00000605457 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
TUBE1-211ENST00000605457 MT1GP13640 62 aa5.08□□□□□ -1.6
TUBE1-211ENST00000605457 MT1LQ93083 61 aa5.08□□□□□ -1.6
TUBE1-211ENST00000605457 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
TUBE1-211ENST00000605457 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
TUBE1-211ENST00000605457 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
TUBE1-211ENST00000605457 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
TUBE1-211ENST00000605457 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
TUBE1-211ENST00000605457 MT1MQ8N339 61 aa5.01□□□□□ -1.61
TUBE1-211ENST00000605457 ROMO1P60602 79 aa4.92□□□□□ -1.62
TUBE1-211ENST00000605457 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
TUBE1-211ENST00000605457 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
TUBE1-211ENST00000605457 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
TUBE1-211ENST00000605457 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
TUBE1-211ENST00000605457 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
TUBE1-211ENST00000605457 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.66
TUBE1-211ENST00000605457 MT4P47944 62 aa4.61□□□□□ -1.67
TUBE1-211ENST00000605457 KRTAP5-5Q701N2 237 aaPredicted RBP4.59□□□□□ -1.67
TUBE1-211ENST00000605457 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
TUBE1-211ENST00000605457 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
TUBE1-211ENST00000605457 SVIPQ8NHG7 77 aa4.5□□□□□ -1.69
TUBE1-211ENST00000605457 KRTAP5-11Q6L8G4 156 aa4.44□□□□□ -1.7
TUBE1-211ENST00000605457 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
TUBE1-211ENST00000605457 KRTAP9-6A8MVA2 160 aa4.41□□□□□ -1.7
TUBE1-211ENST00000605457 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
TUBE1-211ENST00000605457 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
TUBE1-211ENST00000605457 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
TUBE1-211ENST00000605457 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
TUBE1-211ENST00000605457 GPR98Q8WXG9 6306 aa4.35□□□□□ -1.71
TUBE1-211ENST00000605457 MT1AP04731 61 aa4.32□□□□□ -1.72
TUBE1-211ENST00000605457 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
TUBE1-211ENST00000605457 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
TUBE1-211ENST00000605457 KRTAP5-10Q6L8G5 202 aa4.22□□□□□ -1.73
TUBE1-211ENST00000605457 PRAC1Q96KF2 57 aa4.21□□□□□ -1.73
TUBE1-211ENST00000605457 KTN1-AS1Q86SY8 53 aa4.17□□□□□ -1.74
TUBE1-211ENST00000605457 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
TUBE1-211ENST00000605457 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
TUBE1-211ENST00000605457 LCE1EQ5T753 118 aa4.03□□□□□ -1.76
TUBE1-211ENST00000605457 A0A0A0MQY5 61 aa4.03□□□□□ -1.77
TUBE1-211ENST00000605457 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.77
TUBE1-211ENST00000605457 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
TUBE1-211ENST00000605457 MT3P25713 68 aa3.93□□□□□ -1.78
TUBE1-211ENST00000605457 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
TUBE1-211ENST00000605457 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
TUBE1-211ENST00000605457 KRTAP5-8O75690 187 aa3.82□□□□□ -1.8
TUBE1-211ENST00000605457 MUC5ACP98088 5654 aa3.55□□□□□ -1.84
TUBE1-211ENST00000605457 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
TUBE1-211ENST00000605457 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
TUBE1-211ENST00000605457 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
TUBE1-211ENST00000605457 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
TUBE1-211ENST00000605457 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
TUBE1-211ENST00000605457 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
TUBE1-211ENST00000605457 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
TUBE1-211ENST00000605457 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
TUBE1-211ENST00000605457 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
TUBE1-211ENST00000605457 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
TUBE1-211ENST00000605457 INE1O15225 51 aa2.71□□□□□ -1.98
TUBE1-211ENST00000605457 PHGR1C9JFL3 82 aa2.58□□□□□ -2
TUBE1-211ENST00000605457 PRM1P04553 51 aa2.53□□□□□ -2
TUBE1-211ENST00000605457 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
TUBE1-211ENST00000605457 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.12
TUBE1-211ENST00000605457 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms