RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
LSM1P2-201ENST00000604911 RNF213Q63HN8 5207 aa1.99□□□□□ -2.09
LSM1P2-201ENST00000604911 PKHD1P08F94 4074 aa1.98□□□□□ -2.09
LSM1P2-201ENST00000604911 FSIP2Q5CZC0 6907 aa1.98□□□□□ -2.09
LSM1P2-201ENST00000604911 FAT2Q9NYQ8 4349 aa1.98□□□□□ -2.09
LSM1P2-201ENST00000604911 KRTAP10-4P60372 401 aaPredicted RBP1.96□□□□□ -2.1
LSM1P2-201ENST00000604911 DNAH2Q9P225 4427 aa1.94□□□□□ -2.1
LSM1P2-201ENST00000604911 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
LSM1P2-201ENST00000604911 VPS13BQ7Z7G8 4022 aa1.92□□□□□ -2.1
LSM1P2-201ENST00000604911 DNAH6Q9C0G6 4158 aa1.91□□□□□ -2.1
LSM1P2-201ENST00000604911 FAT1Q14517 4588 aa1.9□□□□□ -2.11
LSM1P2-201ENST00000604911 CRCT1Q9UGL9 99 aa1.9□□□□□ -2.11
LSM1P2-201ENST00000604911 DNAH17Q9UFH2 4485 aa1.9□□□□□ -2.11
LSM1P2-201ENST00000604911 APOBP04114 4563 aaKnown RBP1.89□□□□□ -2.11
LSM1P2-201ENST00000604911 PKD1P98161 4303 aa1.88□□□□□ -2.11
LSM1P2-201ENST00000604911 SMR3BP02814 79 aaPredicted RBP1.87□□□□□ -2.11
LSM1P2-201ENST00000604911 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
LSM1P2-201ENST00000604911 LRP2P98164 4655 aa1.85□□□□□ -2.11
LSM1P2-201ENST00000604911 LRP1BQ9NZR2 4599 aa1.83□□□□□ -2.12
LSM1P2-201ENST00000604911 PKHD1L1Q86WI1 4243 aa1.81□□□□□ -2.12
LSM1P2-201ENST00000604911 DNAH5Q8TE73 4624 aa1.81□□□□□ -2.12
LSM1P2-201ENST00000604911 FAT3Q8TDW7 4589 aa1.8□□□□□ -2.12
LSM1P2-201ENST00000604911 NEBP20929 6669 aa1.76□□□□□ -2.13
LSM1P2-201ENST00000604911 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
LSM1P2-201ENST00000604911 SYNE2Q8WXH0 6885 aaKnown RBP1.75□□□□□ -2.13
LSM1P2-201ENST00000604911 SSPOA2VEC9 5147 aa1.74□□□□□ -2.13
LSM1P2-201ENST00000604911 LRP1Q07954 4544 aaKnown RBP1.74□□□□□ -2.13
LSM1P2-201ENST00000604911 PRM1P04553 51 aa1.74□□□□□ -2.13
LSM1P2-201ENST00000604911 KRTAP19-5Q3LI72 72 aa1.74□□□□□ -2.13
LSM1P2-201ENST00000604911 TNXBP22105 4242 aa1.74□□□□□ -2.13
LSM1P2-201ENST00000604911 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
LSM1P2-201ENST00000604911 SPRR2GQ9BYE4 73 aa1.69□□□□□ -2.14
LSM1P2-201ENST00000604911 LPAP08519 4548 aa1.66□□□□□ -2.14
LSM1P2-201ENST00000604911 MT1AP04731 61 aa1.66□□□□□ -2.14
LSM1P2-201ENST00000604911 KRTAP4-1Q9BYQ7 146 aa1.65□□□□□ -2.15
LSM1P2-201ENST00000604911 KRTAP20-1Q3LI63 56 aa1.62□□□□□ -2.15
LSM1P2-201ENST00000604911 USH2AO75445 5202 aa1.62□□□□□ -2.15
LSM1P2-201ENST00000604911 FCGBPQ9Y6R7 5405 aaPredicted RBP1.59□□□□□ -2.15
LSM1P2-201ENST00000604911 MT1EP04732 61 aa1.53□□□□□ -2.16
LSM1P2-201ENST00000604911 KRTAP19-8Q3LI54 63 aa1.52□□□□□ -2.17
LSM1P2-201ENST00000604911 MUC12Q9UKN1 5478 aa1.52□□□□□ -2.17
LSM1P2-201ENST00000604911 MUC17Q685J3 4493 aa1.51□□□□□ -2.17
LSM1P2-201ENST00000604911 MT1HL1P0DM35 61 aa1.5□□□□□ -2.17
LSM1P2-201ENST00000604911 MT1XP80297 61 aa1.5□□□□□ -2.17
LSM1P2-201ENST00000604911 KMT2DO14686 5537 aa1.49□□□□□ -2.17
LSM1P2-201ENST00000604911 SPRR2BP35325 72 aa1.49□□□□□ -2.17
LSM1P2-201ENST00000604911 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
LSM1P2-201ENST00000604911 SPRR2AP35326 72 aa1.48□□□□□ -2.17
LSM1P2-201ENST00000604911 SPRR2DP22532 72 aa1.47□□□□□ -2.17
LSM1P2-201ENST00000604911 KRTAP6-2Q3LI66 62 aa1.47□□□□□ -2.17
LSM1P2-201ENST00000604911 MT1LQ93083 61 aa1.47□□□□□ -2.17
LSM1P2-201ENST00000604911 SPRR2FQ96RM1 72 aa1.46□□□□□ -2.18
LSM1P2-201ENST00000604911 AHNAK2Q8IVF2 5795 aa1.45□□□□□ -2.18
LSM1P2-201ENST00000604911 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
LSM1P2-201ENST00000604911 SPRR2EP22531 72 aa1.38□□□□□ -2.19
LSM1P2-201ENST00000604911 KRTAP19-3Q7Z4W3 81 aa1.38□□□□□ -2.19
LSM1P2-201ENST00000604911 MDN1Q9NU22 5596 aa1.38□□□□□ -2.19
LSM1P2-201ENST00000604911 MT1HP80294 61 aa1.36□□□□□ -2.19
LSM1P2-201ENST00000604911 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
LSM1P2-201ENST00000604911 MT1BP07438 61 aa1.34□□□□□ -2.19
LSM1P2-201ENST00000604911 MUC5BQ9HC84 5762 aaPredicted RBP1.33□□□□□ -2.2
LSM1P2-201ENST00000604911 KRTAP19-7Q3SYF9 63 aa1.32□□□□□ -2.2
LSM1P2-201ENST00000604911 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
LSM1P2-201ENST00000604911 DSTQ03001 7570 aaKnown RBP1.31□□□□□ -2.2
LSM1P2-201ENST00000604911 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
LSM1P2-201ENST00000604911 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
LSM1P2-201ENST00000604911 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
LSM1P2-201ENST00000604911 MT1GP13640 62 aa1.23□□□□□ -2.21
LSM1P2-201ENST00000604911 MUC5ACP98088 5654 aa1.23□□□□□ -2.21
LSM1P2-201ENST00000604911 MT2AP02795 61 aa1.19□□□□□ -2.22
LSM1P2-201ENST00000604911 MT1FP04733 61 aa1.19□□□□□ -2.22
LSM1P2-201ENST00000604911 MT1MQ8N339 61 aa1.15□□□□□ -2.23
LSM1P2-201ENST00000604911 KRTAP6-1Q3LI64 71 aa1.1□□□□□ -2.23
LSM1P2-201ENST00000604911 MT4P47944 62 aa1.07□□□□□ -2.24
LSM1P2-201ENST00000604911 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
LSM1P2-201ENST00000604911 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
LSM1P2-201ENST00000604911 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 82.8 ms