RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PSPHP1O15172 72 aa4.12□□□□□ -1.75
CCDC12-209ENST00000604164 MT1LQ93083 61 aa4.11□□□□□ -1.75
CCDC12-209ENST00000604164 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
CCDC12-209ENST00000604164 MT1MQ8N339 61 aa4.07□□□□□ -1.76
CCDC12-209ENST00000604164 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
CCDC12-209ENST00000604164 DSTQ03001 7570 aaKnown RBP4.04□□□□□ -1.76
CCDC12-209ENST00000604164 A6NED7 52 aa4.03□□□□□ -1.76
CCDC12-209ENST00000604164 RPS28P62857 69 aaKnown RBP4□□□□□ -1.77
CCDC12-209ENST00000604164 KRTAP23-1A1A580 65 aa3.96□□□□□ -1.78
CCDC12-209ENST00000604164 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
CCDC12-209ENST00000604164 PCP4P48539 62 aa3.95□□□□□ -1.78
CCDC12-209ENST00000604164 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
CCDC12-209ENST00000604164 KRTAP19-4Q3LI73 84 aa3.93□□□□□ -1.78
CCDC12-209ENST00000604164 CDC42SE1Q9NRR8 79 aa3.93□□□□□ -1.78
CCDC12-209ENST00000604164 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
CCDC12-209ENST00000604164 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
CCDC12-209ENST00000604164 MT4P47944 62 aa3.85□□□□□ -1.79
CCDC12-209ENST00000604164 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
CCDC12-209ENST00000604164 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
CCDC12-209ENST00000604164 ROMO1P60602 79 aa3.84□□□□□ -1.79
CCDC12-209ENST00000604164 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
CCDC12-209ENST00000604164 HMCN1Q96RW7 5635 aa3.73□□□□□ -1.81
CCDC12-209ENST00000604164 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
CCDC12-209ENST00000604164 KRTAP5-5Q701N2 237 aaPredicted RBP3.72□□□□□ -1.81
CCDC12-209ENST00000604164 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
CCDC12-209ENST00000604164 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
CCDC12-209ENST00000604164 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
CCDC12-209ENST00000604164 SPRR5A0A1B0GTR4 108 aa3.67□□□□□ -1.82
CCDC12-209ENST00000604164 LOC100996750A0A140TA64 210 aa3.65□□□□□ -1.83
CCDC12-209ENST00000604164 KRTAP20-2Q3LI61 65 aa3.63□□□□□ -1.83
CCDC12-209ENST00000604164 KRTAP5-10Q6L8G5 202 aa3.57□□□□□ -1.84
CCDC12-209ENST00000604164 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
CCDC12-209ENST00000604164 MT1AP04731 61 aa3.52□□□□□ -1.85
CCDC12-209ENST00000604164 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
CCDC12-209ENST00000604164 BRK1Q8WUW1 75 aa3.5□□□□□ -1.85
CCDC12-209ENST00000604164 KRTAP6-1Q3LI64 71 aa3.45□□□□□ -1.86
CCDC12-209ENST00000604164 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
CCDC12-209ENST00000604164 KRTAP9-6A8MVA2 160 aa3.44□□□□□ -1.86
CCDC12-209ENST00000604164 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
CCDC12-209ENST00000604164 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.87
CCDC12-209ENST00000604164 KRTAP5-2Q701N4 177 aa3.38□□□□□ -1.87
CCDC12-209ENST00000604164 PMAIP1Q13794 54 aa3.32□□□□□ -1.88
CCDC12-209ENST00000604164 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
CCDC12-209ENST00000604164 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
CCDC12-209ENST00000604164 MT3P25713 68 aa3.25□□□□□ -1.89
CCDC12-209ENST00000604164 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
CCDC12-209ENST00000604164 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
CCDC12-209ENST00000604164 PRO0628Q9UI54 55 aa3.1□□□□□ -1.91
CCDC12-209ENST00000604164 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
CCDC12-209ENST00000604164 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
CCDC12-209ENST00000604164 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CCDC12-209ENST00000604164 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
CCDC12-209ENST00000604164 KTN1-AS1Q86SY8 53 aa2.96□□□□□ -1.94
CCDC12-209ENST00000604164 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
CCDC12-209ENST00000604164 MUC5BQ9HC84 5762 aaPredicted RBP2.89□□□□□ -1.95
CCDC12-209ENST00000604164 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
CCDC12-209ENST00000604164 SVIPQ8NHG7 77 aa2.85□□□□□ -1.95
CCDC12-209ENST00000604164 LUZP6Q538Z0 58 aa2.76□□□□□ -1.97
CCDC12-209ENST00000604164 LCE1BQ5T7P3 118 aa2.75□□□□□ -1.97
CCDC12-209ENST00000604164 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
CCDC12-209ENST00000604164 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
CCDC12-209ENST00000604164 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
CCDC12-209ENST00000604164 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
CCDC12-209ENST00000604164 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CCDC12-209ENST00000604164 KRTAP5-11Q6L8G4 156 aa2.47□□□□□ -2.01
CCDC12-209ENST00000604164 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
CCDC12-209ENST00000604164 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
CCDC12-209ENST00000604164 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
CCDC12-209ENST00000604164 NDUFAF8A1L188 74 aa2.16□□□□□ -2.06
CCDC12-209ENST00000604164 PHGR1C9JFL3 82 aa2.13□□□□□ -2.07
CCDC12-209ENST00000604164 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
CCDC12-209ENST00000604164 PRM1P04553 51 aa1.94□□□□□ -2.1
CCDC12-209ENST00000604164 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
CCDC12-209ENST00000604164 INE1O15225 51 aa1.81□□□□□ -2.12
CCDC12-209ENST00000604164 A0A0A0MQY5 61 aa1.8□□□□□ -2.12
CCDC12-209ENST00000604164 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CCDC12-209ENST00000604164 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
CCDC12-209ENST00000604164 H3BS24 57 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 255.2 ms