RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
GRAMD1A-214ENST00000603907 MT1EP04732 61 aa7.69□□□□□ -1.18
GRAMD1A-214ENST00000603907 ROMO1P60602 79 aa7.69□□□□□ -1.18
GRAMD1A-214ENST00000603907 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
GRAMD1A-214ENST00000603907 DSTQ03001 7570 aaKnown RBP7.64□□□□□ -1.19
GRAMD1A-214ENST00000603907 KRTAP4-9Q9BYQ8 210 aa7.63□□□□□ -1.19
GRAMD1A-214ENST00000603907 KRTAP23-1A1A580 65 aa7.62□□□□□ -1.19
GRAMD1A-214ENST00000603907 BRK1Q8WUW1 75 aa7.61□□□□□ -1.19
GRAMD1A-214ENST00000603907 KRTAP19-3Q7Z4W3 81 aa7.55□□□□□ -1.2
GRAMD1A-214ENST00000603907 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
GRAMD1A-214ENST00000603907 LCE5AQ5TCM9 118 aa7.5□□□□□ -1.21
GRAMD1A-214ENST00000603907 MT1GP13640 62 aa7.45□□□□□ -1.22
GRAMD1A-214ENST00000603907 PP632Q6XCG6 107 aa7.43□□□□□ -1.22
GRAMD1A-214ENST00000603907 MT1LQ93083 61 aa7.43□□□□□ -1.22
GRAMD1A-214ENST00000603907 LCE1DQ5T752 114 aa7.4□□□□□ -1.22
GRAMD1A-214ENST00000603907 MT1MQ8N339 61 aa7.28□□□□□ -1.24
GRAMD1A-214ENST00000603907 LCE4AQ5TA78 99 aa7.27□□□□□ -1.25
GRAMD1A-214ENST00000603907 MT4P47944 62 aa7.25□□□□□ -1.25
GRAMD1A-214ENST00000603907 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
GRAMD1A-214ENST00000603907 HMCN1Q96RW7 5635 aa7.2□□□□□ -1.26
GRAMD1A-214ENST00000603907 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
GRAMD1A-214ENST00000603907 KRTAP15-1Q3LI76 137 aa7.19□□□□□ -1.26
GRAMD1A-214ENST00000603907 KRTAP5-10Q6L8G5 202 aa7.14□□□□□ -1.27
GRAMD1A-214ENST00000603907 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
GRAMD1A-214ENST00000603907 AHNAK2Q8IVF2 5795 aa7.11□□□□□ -1.27
GRAMD1A-214ENST00000603907 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
GRAMD1A-214ENST00000603907 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.29
GRAMD1A-214ENST00000603907 KRTAP5-4Q6L8H1 288 aa6.99□□□□□ -1.29
GRAMD1A-214ENST00000603907 LCE3CQ5T5A8 94 aa6.96□□□□□ -1.3
GRAMD1A-214ENST00000603907 KRTAP5-7Q6L8G8 165 aa6.96□□□□□ -1.3
GRAMD1A-214ENST00000603907 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
GRAMD1A-214ENST00000603907 KRTAP5-3Q6L8H2 238 aa6.86□□□□□ -1.31
GRAMD1A-214ENST00000603907 PRAC1Q96KF2 57 aa6.75□□□□□ -1.33
GRAMD1A-214ENST00000603907 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
GRAMD1A-214ENST00000603907 KTN1-AS1Q86SY8 53 aa6.69□□□□□ -1.34
GRAMD1A-214ENST00000603907 KRTAP20-2Q3LI61 65 aa6.65□□□□□ -1.34
GRAMD1A-214ENST00000603907 KRTAP5-5Q701N2 237 aaPredicted RBP6.65□□□□□ -1.34
GRAMD1A-214ENST00000603907 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
GRAMD1A-214ENST00000603907 KRTAP9-6A8MVA2 160 aa6.5□□□□□ -1.37
GRAMD1A-214ENST00000603907 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
GRAMD1A-214ENST00000603907 SYNE1Q8NF91 8797 aaKnown RBP6.37□□□□□ -1.39
GRAMD1A-214ENST00000603907 MT1AP04731 61 aa6.35□□□□□ -1.39
GRAMD1A-214ENST00000603907 SVIPQ8NHG7 77 aa6.31□□□□□ -1.4
GRAMD1A-214ENST00000603907 KRTAP6-1Q3LI64 71 aa6.24□□□□□ -1.41
GRAMD1A-214ENST00000603907 KRTAP4-11Q9BYQ6 195 aa6.21□□□□□ -1.42
GRAMD1A-214ENST00000603907 KRTAP9-4Q9BYQ2 154 aa6.08□□□□□ -1.44
GRAMD1A-214ENST00000603907 KRTAP5-2Q701N4 177 aa6.02□□□□□ -1.45
GRAMD1A-214ENST00000603907 MUC5ACP98088 5654 aa6□□□□□ -1.45
GRAMD1A-214ENST00000603907 KRTAP5-8O75690 187 aa6□□□□□ -1.45
GRAMD1A-214ENST00000603907 AHNAKQ09666 5890 aaKnown RBP5.99□□□□□ -1.45
GRAMD1A-214ENST00000603907 MUC5BQ9HC84 5762 aaPredicted RBP5.92□□□□□ -1.46
GRAMD1A-214ENST00000603907 KRTAP6-2Q3LI66 62 aa5.87□□□□□ -1.47
GRAMD1A-214ENST00000603907 KRTAP9-9Q9BYP9 154 aa5.84□□□□□ -1.47
GRAMD1A-214ENST00000603907 MT3P25713 68 aa5.81□□□□□ -1.48
GRAMD1A-214ENST00000603907 LUZP6Q538Z0 58 aa5.72□□□□□ -1.49
GRAMD1A-214ENST00000603907 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
GRAMD1A-214ENST00000603907 KRTAP5-1Q6L8H4 278 aa5.5□□□□□ -1.53
GRAMD1A-214ENST00000603907 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
GRAMD1A-214ENST00000603907 LCE3DQ9BYE3 92 aa5.12□□□□□ -1.59
GRAMD1A-214ENST00000603907 NDUFAF8A1L188 74 aa5□□□□□ -1.61
GRAMD1A-214ENST00000603907 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
GRAMD1A-214ENST00000603907 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
GRAMD1A-214ENST00000603907 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
GRAMD1A-214ENST00000603907 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
GRAMD1A-214ENST00000603907 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
GRAMD1A-214ENST00000603907 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
GRAMD1A-214ENST00000603907 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
GRAMD1A-214ENST00000603907 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
GRAMD1A-214ENST00000603907 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
GRAMD1A-214ENST00000603907 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
GRAMD1A-214ENST00000603907 INE1O15225 51 aa4.19□□□□□ -1.74
GRAMD1A-214ENST00000603907 KRTAP21-2Q3LI59 83 aa4.12□□□□□ -1.75
GRAMD1A-214ENST00000603907 PRM1P04553 51 aa3.93□□□□□ -1.78
GRAMD1A-214ENST00000603907 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
GRAMD1A-214ENST00000603907 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
GRAMD1A-214ENST00000603907 KRTAP21-1Q3LI58 79 aa3.22□□□□□ -1.89
GRAMD1A-214ENST00000603907 H3BS24 57 aa3.12□□□□□ -1.91
GRAMD1A-214ENST00000603907 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 102.9 ms