RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 KRTAP2-2Q9BYT5 123 aa7.27□□□□□ -1.25
SSBP4-210ENST00000601444 KRTAP2-1Q9BYU5 128 aa7.27□□□□□ -1.25
SSBP4-210ENST00000601444 MT1LQ93083 61 aa7.17□□□□□ -1.26
SSBP4-210ENST00000601444 MT1GP13640 62 aa7.16□□□□□ -1.26
SSBP4-210ENST00000601444 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
SSBP4-210ENST00000601444 KRTAP12-3P60328 96 aa7.08□□□□□ -1.28
SSBP4-210ENST00000601444 MT1MQ8N339 61 aa7.07□□□□□ -1.28
SSBP4-210ENST00000601444 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
SSBP4-210ENST00000601444 PP632Q6XCG6 107 aa7.05□□□□□ -1.28
SSBP4-210ENST00000601444 DSTQ03001 7570 aaKnown RBP7.03□□□□□ -1.28
SSBP4-210ENST00000601444 KRTAP4-3Q9BYR4 195 aa6.97□□□□□ -1.29
SSBP4-210ENST00000601444 ROMO1P60602 79 aa6.93□□□□□ -1.3
SSBP4-210ENST00000601444 KRTAP23-1A1A580 65 aa6.9□□□□□ -1.3
SSBP4-210ENST00000601444 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
SSBP4-210ENST00000601444 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
SSBP4-210ENST00000601444 KRTAP15-1Q3LI76 137 aa6.7□□□□□ -1.34
SSBP4-210ENST00000601444 BRK1Q8WUW1 75 aa6.63□□□□□ -1.35
SSBP4-210ENST00000601444 KRTAP19-4Q3LI73 84 aa6.62□□□□□ -1.35
SSBP4-210ENST00000601444 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
SSBP4-210ENST00000601444 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
SSBP4-210ENST00000601444 KRTAP5-4Q6L8H1 288 aa6.57□□□□□ -1.36
SSBP4-210ENST00000601444 MT4P47944 62 aa6.56□□□□□ -1.36
SSBP4-210ENST00000601444 LCE3CQ5T5A8 94 aa6.55□□□□□ -1.36
SSBP4-210ENST00000601444 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
SSBP4-210ENST00000601444 KRTAP5-5Q701N2 237 aaPredicted RBP6.46□□□□□ -1.38
SSBP4-210ENST00000601444 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
SSBP4-210ENST00000601444 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
SSBP4-210ENST00000601444 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
SSBP4-210ENST00000601444 KRTAP9-6A8MVA2 160 aa6.24□□□□□ -1.41
SSBP4-210ENST00000601444 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
SSBP4-210ENST00000601444 KRTAP12-4P60329 112 aa6.18□□□□□ -1.42
SSBP4-210ENST00000601444 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
SSBP4-210ENST00000601444 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
SSBP4-210ENST00000601444 GPR98Q8WXG9 6306 aa6.15□□□□□ -1.43
SSBP4-210ENST00000601444 MT1AP04731 61 aa6.08□□□□□ -1.44
SSBP4-210ENST00000601444 KRTAP6-1Q3LI64 71 aa6.07□□□□□ -1.44
SSBP4-210ENST00000601444 AHNAK2Q8IVF2 5795 aa6.06□□□□□ -1.44
SSBP4-210ENST00000601444 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
SSBP4-210ENST00000601444 PRO0628Q9UI54 55 aa6□□□□□ -1.45
SSBP4-210ENST00000601444 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
SSBP4-210ENST00000601444 KRTAP5-10Q6L8G5 202 aa5.96□□□□□ -1.46
SSBP4-210ENST00000601444 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
SSBP4-210ENST00000601444 KRTAP5-2Q701N4 177 aa5.8□□□□□ -1.48
SSBP4-210ENST00000601444 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
SSBP4-210ENST00000601444 KRTAP5-7Q6L8G8 165 aa5.67□□□□□ -1.5
SSBP4-210ENST00000601444 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
SSBP4-210ENST00000601444 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
SSBP4-210ENST00000601444 MT3P25713 68 aa5.54□□□□□ -1.52
SSBP4-210ENST00000601444 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
SSBP4-210ENST00000601444 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
SSBP4-210ENST00000601444 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
SSBP4-210ENST00000601444 KRTAP5-1Q6L8H4 278 aa5.17□□□□□ -1.58
SSBP4-210ENST00000601444 KRTAP9-9Q9BYP9 154 aa5.03□□□□□ -1.6
SSBP4-210ENST00000601444 MUC5ACP98088 5654 aa5□□□□□ -1.61
SSBP4-210ENST00000601444 LCE1EQ5T753 118 aa5□□□□□ -1.61
SSBP4-210ENST00000601444 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
SSBP4-210ENST00000601444 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
SSBP4-210ENST00000601444 AHNAKQ09666 5890 aaKnown RBP4.89□□□□□ -1.63
SSBP4-210ENST00000601444 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
SSBP4-210ENST00000601444 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
SSBP4-210ENST00000601444 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
SSBP4-210ENST00000601444 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
SSBP4-210ENST00000601444 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
SSBP4-210ENST00000601444 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
SSBP4-210ENST00000601444 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
SSBP4-210ENST00000601444 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
SSBP4-210ENST00000601444 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
SSBP4-210ENST00000601444 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
SSBP4-210ENST00000601444 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
SSBP4-210ENST00000601444 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
SSBP4-210ENST00000601444 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
SSBP4-210ENST00000601444 PRM1P04553 51 aa3.58□□□□□ -1.84
SSBP4-210ENST00000601444 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
SSBP4-210ENST00000601444 INE1O15225 51 aa3.43□□□□□ -1.86
SSBP4-210ENST00000601444 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SSBP4-210ENST00000601444 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SSBP4-210ENST00000601444 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
SSBP4-210ENST00000601444 H3BS24 57 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 98.3 ms