RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	PRO0628	Q9UI54	55 aa		5.57	□□□□□ -1.52
PLD3-223	ENST00000600948	UQCR11	O14957	56 aa		5.54	□□□□□ -1.52
PLD3-223	ENST00000600948	SVIP	Q8NHG7	77 aa		5.54	□□□□□ -1.52
PLD3-223	ENST00000600948	BRK1	Q8WUW1	75 aa		5.53	□□□□□ -1.52
PLD3-223	ENST00000600948	MT1L	Q93083	61 aa		5.53	□□□□□ -1.52
PLD3-223	ENST00000600948	DST	Q03001	7570 aa	Known RBP	5.52	□□□□□ -1.53
PLD3-223	ENST00000600948	PP632	Q6XCG6	107 aa		5.51	□□□□□ -1.53
PLD3-223	ENST00000600948	MT1M	Q8N339	61 aa		5.5	□□□□□ -1.53
PLD3-223	ENST00000600948		A6NED7	52 aa		5.47	□□□□□ -1.53
PLD3-223	ENST00000600948	CDC42SE1	Q9NRR8	79 aa		5.47	□□□□□ -1.53
PLD3-223	ENST00000600948	MIR22HG	Q0VDD5	57 aa		5.42	□□□□□ -1.54
PLD3-223	ENST00000600948	KRTAP4-9	Q9BYQ8	210 aa		5.39	□□□□□ -1.55
PLD3-223	ENST00000600948	KRTAP4-3	Q9BYR4	195 aa		5.36	□□□□□ -1.55
PLD3-223	ENST00000600948	KRTAP12-3	P60328	96 aa		5.35	□□□□□ -1.55
PLD3-223	ENST00000600948	KRTAP25-1	Q3LHN0	102 aa		5.3	□□□□□ -1.56
PLD3-223	ENST00000600948		K7ERS5	55 aa		5.29	□□□□□ -1.56
PLD3-223	ENST00000600948	LCE1D	Q5T752	114 aa		5.29	□□□□□ -1.56
PLD3-223	ENST00000600948	LCE4A	Q5TA78	99 aa		5.29	□□□□□ -1.56
PLD3-223	ENST00000600948	KRTAP4-7	Q9BYR0	210 aa		5.26	□□□□□ -1.57
PLD3-223	ENST00000600948	PMAIP1	Q13794	54 aa		5.24	□□□□□ -1.57
PLD3-223	ENST00000600948	MT4	P47944	62 aa		5.22	□□□□□ -1.57
PLD3-223	ENST00000600948	KRTAP5-4	Q6L8H1	288 aa		5.22	□□□□□ -1.57
PLD3-223	ENST00000600948	HMCN1	Q96RW7	5635 aa		5.16	□□□□□ -1.58
PLD3-223	ENST00000600948	KTN1-AS1	Q86SY8	53 aa		5.13	□□□□□ -1.59
PLD3-223	ENST00000600948	GPR98	Q8WXG9	6306 aa		5.11	□□□□□ -1.59
PLD3-223	ENST00000600948	KRTAP23-1	A1A580	65 aa		5.11	□□□□□ -1.59
PLD3-223	ENST00000600948	KRTAP4-6	Q9BYQ5	205 aa		5.09	□□□□□ -1.59
PLD3-223	ENST00000600948	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.05	□□□□□ -1.6
PLD3-223	ENST00000600948	KRTAP19-4	Q3LI73	84 aa		5.04	□□□□□ -1.6
PLD3-223	ENST00000600948	KRTAP15-1	Q3LI76	137 aa		5.02	□□□□□ -1.61
PLD3-223	ENST00000600948	LOC100996750	A0A140TA64	210 aa		4.97	□□□□□ -1.61
PLD3-223	ENST00000600948	AHNAK2	Q8IVF2	5795 aa		4.97	□□□□□ -1.61
PLD3-223	ENST00000600948	ROMO1	P60602	79 aa		4.96	□□□□□ -1.62
PLD3-223	ENST00000600948	LCE3C	Q5T5A8	94 aa		4.93	□□□□□ -1.62
PLD3-223	ENST00000600948	KRTAP20-2	Q3LI61	65 aa		4.92	□□□□□ -1.62
PLD3-223	ENST00000600948	SPRR5	A0A1B0GTR4	108 aa		4.89	□□□□□ -1.63
PLD3-223	ENST00000600948	KRTAP5-10	Q6L8G5	202 aa		4.89	□□□□□ -1.63
PLD3-223	ENST00000600948	KRTAP12-4	P60329	112 aa		4.87	□□□□□ -1.63
PLD3-223	ENST00000600948	PRAC1	Q96KF2	57 aa		4.86	□□□□□ -1.63
PLD3-223	ENST00000600948	KRTAP5-3	Q6L8H2	238 aa		4.79	□□□□□ -1.64
PLD3-223	ENST00000600948	SYNE1	Q8NF91	8797 aa	Known RBP	4.78	□□□□□ -1.64
PLD3-223	ENST00000600948	MT1A	P04731	61 aa		4.7	□□□□□ -1.66
PLD3-223	ENST00000600948	KRTAP5-7	Q6L8G8	165 aa		4.7	□□□□□ -1.66
PLD3-223	ENST00000600948	KRTAP9-6	A8MVA2	160 aa		4.68	□□□□□ -1.66
PLD3-223	ENST00000600948	KRTAP6-1	Q3LI64	71 aa		4.67	□□□□□ -1.66
PLD3-223	ENST00000600948	KRTAP4-12	Q9BQ66	201 aa		4.64	□□□□□ -1.67
PLD3-223	ENST00000600948	KRTAP5-2	Q701N4	177 aa		4.58	□□□□□ -1.68
PLD3-223	ENST00000600948	KRTAP9-4	Q9BYQ2	154 aa		4.53	□□□□□ -1.68
PLD3-223	ENST00000600948	KRTAP4-11	Q9BYQ6	195 aa		4.47	□□□□□ -1.69
PLD3-223	ENST00000600948	KRTAP6-2	Q3LI66	62 aa		4.45	□□□□□ -1.7
PLD3-223	ENST00000600948	KRTAP9-9	Q9BYP9	154 aa		4.37	□□□□□ -1.71
PLD3-223	ENST00000600948	KRTAP5-8	O75690	187 aa		4.33	□□□□□ -1.72
PLD3-223	ENST00000600948	MT3	P25713	68 aa		4.29	□□□□□ -1.72
PLD3-223	ENST00000600948		A0A0A0MQY5	61 aa		4.23	□□□□□ -1.73
PLD3-223	ENST00000600948	OBSCN	Q5VST9	7968 aa		4.18	□□□□□ -1.74
PLD3-223	ENST00000600948	KRTAP5-1	Q6L8H4	278 aa		4.1	□□□□□ -1.75
PLD3-223	ENST00000600948	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.07	□□□□□ -1.76
PLD3-223	ENST00000600948	MUC5AC	P98088	5654 aa		4.04	□□□□□ -1.76
PLD3-223	ENST00000600948	AHNAK	Q09666	5890 aa	Known RBP	4.04	□□□□□ -1.76
PLD3-223	ENST00000600948	LUZP6	Q538Z0	58 aa		3.98	□□□□□ -1.77
PLD3-223	ENST00000600948	NDUFAF8	A1L188	74 aa		3.95	□□□□□ -1.78
PLD3-223	ENST00000600948	LCE1E	Q5T753	118 aa		3.92	□□□□□ -1.78
PLD3-223	ENST00000600948	KRTAP4-2	Q9BYR5	136 aa		3.85	□□□□□ -1.79
PLD3-223	ENST00000600948	LCE1B	Q5T7P3	118 aa		3.68	□□□□□ -1.82
PLD3-223	ENST00000600948	LCE1C	Q5T751	118 aa		3.65	□□□□□ -1.83
PLD3-223	ENST00000600948	LCE3D	Q9BYE3	92 aa		3.55	□□□□□ -1.84
PLD3-223	ENST00000600948	INE1	O15225	51 aa		3.37	□□□□□ -1.87
PLD3-223	ENST00000600948	LCE3E	Q5T5B0	92 aa		3.35	□□□□□ -1.87
PLD3-223	ENST00000600948	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.33	□□□□□ -1.88
PLD3-223	ENST00000600948	KRTAP5-11	Q6L8G4	156 aa		3.31	□□□□□ -1.88
PLD3-223	ENST00000600948	LCE1F	Q5T754	118 aa		3.19	□□□□□ -1.9
PLD3-223	ENST00000600948	KRTAP21-2	Q3LI59	83 aa		3.08	□□□□□ -1.92
PLD3-223	ENST00000600948	PHGR1	C9JFL3	82 aa		2.85	□□□□□ -1.95
PLD3-223	ENST00000600948	KRTAP4-4	Q9BYR3	166 aa		2.81	□□□□□ -1.96
PLD3-223	ENST00000600948	MUC19	Q7Z5P9	8384 aa		2.57	□□□□□ -2
PLD3-223	ENST00000600948	PRM1	P04553	51 aa		2.54	□□□□□ -2
PLD3-223	ENST00000600948	KRTAP21-1	Q3LI58	79 aa		2.15	□□□□□ -2.07
PLD3-223	ENST00000600948	MUC16	Q8WXI7	14507 aa		1.84	□□□□□ -2.12

Retrieved 78 of 20,778 RNA–protein pairs in 88.6 ms