RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
FARP1-229ENST00000600190 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
FARP1-229ENST00000600190 MT1EP04732 61 aa7.02□□□□□ -1.29
FARP1-229ENST00000600190 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
FARP1-229ENST00000600190 CDC42SE1Q9NRR8 79 aa6.89□□□□□ -1.31
FARP1-229ENST00000600190 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
FARP1-229ENST00000600190 MT1GP13640 62 aa6.84□□□□□ -1.31
FARP1-229ENST00000600190 LCE3AQ5TA76 89 aa6.84□□□□□ -1.31
FARP1-229ENST00000600190 HMCN1Q96RW7 5635 aa6.84□□□□□ -1.31
FARP1-229ENST00000600190 KRTAP19-5Q3LI72 72 aa6.82□□□□□ -1.32
FARP1-229ENST00000600190 MT4P47944 62 aa6.81□□□□□ -1.32
FARP1-229ENST00000600190 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
FARP1-229ENST00000600190 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
FARP1-229ENST00000600190 MT1MQ8N339 61 aa6.72□□□□□ -1.33
FARP1-229ENST00000600190 AHNAK2Q8IVF2 5795 aa6.71□□□□□ -1.34
FARP1-229ENST00000600190 ROMO1P60602 79 aa6.7□□□□□ -1.34
FARP1-229ENST00000600190 MT1LQ93083 61 aa6.65□□□□□ -1.34
FARP1-229ENST00000600190 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
FARP1-229ENST00000600190 KRTAP12-3P60328 96 aa6.62□□□□□ -1.35
FARP1-229ENST00000600190 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
FARP1-229ENST00000600190 KRTAP5-4Q6L8H1 288 aa6.58□□□□□ -1.36
FARP1-229ENST00000600190 KRTAP5-10Q6L8G5 202 aa6.56□□□□□ -1.36
FARP1-229ENST00000600190 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
FARP1-229ENST00000600190 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
FARP1-229ENST00000600190 KRTAP19-4Q3LI73 84 aa6.38□□□□□ -1.39
FARP1-229ENST00000600190 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
FARP1-229ENST00000600190 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
FARP1-229ENST00000600190 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
FARP1-229ENST00000600190 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
FARP1-229ENST00000600190 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
FARP1-229ENST00000600190 KRTAP20-2Q3LI61 65 aa6.25□□□□□ -1.41
FARP1-229ENST00000600190 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
FARP1-229ENST00000600190 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
FARP1-229ENST00000600190 KRTAP5-5Q701N2 237 aaPredicted RBP6.17□□□□□ -1.42
FARP1-229ENST00000600190 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
FARP1-229ENST00000600190 LCE3CQ5T5A8 94 aa6.13□□□□□ -1.43
FARP1-229ENST00000600190 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
FARP1-229ENST00000600190 PRO0628Q9UI54 55 aa6.01□□□□□ -1.45
FARP1-229ENST00000600190 KRTAP4-11Q9BYQ6 195 aa5.8□□□□□ -1.48
FARP1-229ENST00000600190 PRAC1Q96KF2 57 aa5.77□□□□□ -1.49
FARP1-229ENST00000600190 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
FARP1-229ENST00000600190 KTN1-AS1Q86SY8 53 aa5.67□□□□□ -1.5
FARP1-229ENST00000600190 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
FARP1-229ENST00000600190 MT1AP04731 61 aa5.65□□□□□ -1.5
FARP1-229ENST00000600190 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
FARP1-229ENST00000600190 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
FARP1-229ENST00000600190 AHNAKQ09666 5890 aaKnown RBP5.61□□□□□ -1.51
FARP1-229ENST00000600190 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
FARP1-229ENST00000600190 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
FARP1-229ENST00000600190 MUC5BQ9HC84 5762 aaPredicted RBP5.56□□□□□ -1.52
FARP1-229ENST00000600190 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
FARP1-229ENST00000600190 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
FARP1-229ENST00000600190 SVIPQ8NHG7 77 aa5.47□□□□□ -1.53
FARP1-229ENST00000600190 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
FARP1-229ENST00000600190 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
FARP1-229ENST00000600190 MT3P25713 68 aa5.2□□□□□ -1.58
FARP1-229ENST00000600190 KRTAP5-1Q6L8H4 278 aa5.18□□□□□ -1.58
FARP1-229ENST00000600190 LUZP6Q538Z0 58 aa5.04□□□□□ -1.6
FARP1-229ENST00000600190 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
FARP1-229ENST00000600190 LCE1EQ5T753 118 aa4.83□□□□□ -1.64
FARP1-229ENST00000600190 H3BS24 57 aa4.67□□□□□ -1.66
FARP1-229ENST00000600190 LCE1BQ5T7P3 118 aa4.64□□□□□ -1.67
FARP1-229ENST00000600190 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
FARP1-229ENST00000600190 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
FARP1-229ENST00000600190 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
FARP1-229ENST00000600190 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
FARP1-229ENST00000600190 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
FARP1-229ENST00000600190 LCE1FQ5T754 118 aa4.06□□□□□ -1.76
FARP1-229ENST00000600190 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
FARP1-229ENST00000600190 PHGR1C9JFL3 82 aa3.86□□□□□ -1.79
FARP1-229ENST00000600190 KRTAP21-2Q3LI59 83 aa3.72□□□□□ -1.81
FARP1-229ENST00000600190 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
FARP1-229ENST00000600190 INE1O15225 51 aa3.56□□□□□ -1.84
FARP1-229ENST00000600190 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
FARP1-229ENST00000600190 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.86
FARP1-229ENST00000600190 PRM1P04553 51 aa3.41□□□□□ -1.86
FARP1-229ENST00000600190 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
FARP1-229ENST00000600190 MUC16Q8WXI7 14507 aa2.36□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms