RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 TNP1P09430 55 aa4.91□□□□□ -1.62
XRCC1-209ENST00000599693 COA5Q86WW8 74 aa4.89□□□□□ -1.63
XRCC1-209ENST00000599693 A0A1B0GV90 55 aa4.85□□□□□ -1.63
XRCC1-209ENST00000599693 KRTAP12-3P60328 96 aa4.84□□□□□ -1.63
XRCC1-209ENST00000599693 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
XRCC1-209ENST00000599693 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
XRCC1-209ENST00000599693 A8MU10 97 aa4.76□□□□□ -1.65
XRCC1-209ENST00000599693 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
XRCC1-209ENST00000599693 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
XRCC1-209ENST00000599693 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
XRCC1-209ENST00000599693 SERP2Q8N6R1 65 aa4.7□□□□□ -1.66
XRCC1-209ENST00000599693 MUC5ACP98088 5654 aa4.67□□□□□ -1.66
XRCC1-209ENST00000599693 A0A1B0GU69 56 aa4.65□□□□□ -1.67
XRCC1-209ENST00000599693 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
XRCC1-209ENST00000599693 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
XRCC1-209ENST00000599693 KRTAP5-8O75690 187 aa4.6□□□□□ -1.67
XRCC1-209ENST00000599693 K7ERU9 68 aa4.58□□□□□ -1.68
XRCC1-209ENST00000599693 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
XRCC1-209ENST00000599693 MT1AP04731 61 aa4.48□□□□□ -1.69
XRCC1-209ENST00000599693 KRTAP6-1Q3LI64 71 aa4.48□□□□□ -1.69
XRCC1-209ENST00000599693 H7BZZ5 65 aa4.47□□□□□ -1.69
XRCC1-209ENST00000599693 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
XRCC1-209ENST00000599693 COX7CP15954 63 aa4.42□□□□□ -1.7
XRCC1-209ENST00000599693 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
XRCC1-209ENST00000599693 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
XRCC1-209ENST00000599693 PRR15LQ9BU68 103 aa4.38□□□□□ -1.71
XRCC1-209ENST00000599693 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
XRCC1-209ENST00000599693 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
XRCC1-209ENST00000599693 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
XRCC1-209ENST00000599693 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
XRCC1-209ENST00000599693 KRTAP23-1A1A580 65 aa4.23□□□□□ -1.73
XRCC1-209ENST00000599693 LINC01558Q9Y6Z2 57 aa4.23□□□□□ -1.73
XRCC1-209ENST00000599693 UQCR11O14957 56 aa4.22□□□□□ -1.73
XRCC1-209ENST00000599693 KRTAP5-1Q6L8H4 278 aa4.22□□□□□ -1.73
XRCC1-209ENST00000599693 KRTAP9-6A8MVA2 160 aa4.18□□□□□ -1.74
XRCC1-209ENST00000599693 ANAPC13Q9BS18 74 aa4.17□□□□□ -1.74
XRCC1-209ENST00000599693 MT3P25713 68 aa4.11□□□□□ -1.75
XRCC1-209ENST00000599693 K7ERS5 55 aa4.09□□□□□ -1.75
XRCC1-209ENST00000599693 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
XRCC1-209ENST00000599693 PCP4P48539 62 aa4.08□□□□□ -1.76
XRCC1-209ENST00000599693 ATP5EP56381 51 aaPredicted RBP4.07□□□□□ -1.76
XRCC1-209ENST00000599693 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
XRCC1-209ENST00000599693 TMEM258P61165 79 aa3.97□□□□□ -1.77
XRCC1-209ENST00000599693 RPS28P62857 69 aaKnown RBP3.91□□□□□ -1.78
XRCC1-209ENST00000599693 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
XRCC1-209ENST00000599693 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
XRCC1-209ENST00000599693 Q1T7F1 81 aa3.78□□□□□ -1.8
XRCC1-209ENST00000599693 PSPHP1O15172 72 aa3.75□□□□□ -1.81
XRCC1-209ENST00000599693 ROMO1P60602 79 aa3.73□□□□□ -1.81
XRCC1-209ENST00000599693 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
XRCC1-209ENST00000599693 V9GYY9 64 aa3.7□□□□□ -1.82
XRCC1-209ENST00000599693 LCE1BQ5T7P3 118 aa3.69□□□□□ -1.82
XRCC1-209ENST00000599693 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
XRCC1-209ENST00000599693 A6NED7 52 aa3.6□□□□□ -1.83
XRCC1-209ENST00000599693 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
XRCC1-209ENST00000599693 KRTAP5-11Q6L8G4 156 aa3.36□□□□□ -1.87
XRCC1-209ENST00000599693 BRK1Q8WUW1 75 aa3.35□□□□□ -1.87
XRCC1-209ENST00000599693 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
XRCC1-209ENST00000599693 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
XRCC1-209ENST00000599693 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
XRCC1-209ENST00000599693 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
XRCC1-209ENST00000599693 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
XRCC1-209ENST00000599693 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
XRCC1-209ENST00000599693 KTN1-AS1Q86SY8 53 aa3.04□□□□□ -1.92
XRCC1-209ENST00000599693 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
XRCC1-209ENST00000599693 PRAC1Q96KF2 57 aa2.94□□□□□ -1.94
XRCC1-209ENST00000599693 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
XRCC1-209ENST00000599693 SVIPQ8NHG7 77 aa2.82□□□□□ -1.96
XRCC1-209ENST00000599693 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
XRCC1-209ENST00000599693 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
XRCC1-209ENST00000599693 LUZP6Q538Z0 58 aa2.48□□□□□ -2.01
XRCC1-209ENST00000599693 H3BS24 57 aa2.45□□□□□ -2.02
XRCC1-209ENST00000599693 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
XRCC1-209ENST00000599693 NDUFAF8A1L188 74 aa2.31□□□□□ -2.04
XRCC1-209ENST00000599693 A0A0A0MQY5 61 aa2.04□□□□□ -2.08
XRCC1-209ENST00000599693 INE1O15225 51 aa1.97□□□□□ -2.09
XRCC1-209ENST00000599693 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
XRCC1-209ENST00000599693 PRM1P04553 51 aa1.88□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 95.1 ms