RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 NEBP20929 6669 aa3.61□□□□□ -1.83
SNRNP70-208ENST00000599687 RPS28P62857 69 aaKnown RBP3.58□□□□□ -1.84
SNRNP70-208ENST00000599687 SPTSSBQ8NFR3 76 aa3.57□□□□□ -1.84
SNRNP70-208ENST00000599687 SNURFQ9Y675 71 aa3.56□□□□□ -1.84
SNRNP70-208ENST00000599687 CHKB-CPT1BH3BT56 60 aa3.53□□□□□ -1.84
SNRNP70-208ENST00000599687 KRTAP20-1Q3LI63 56 aa3.53□□□□□ -1.84
SNRNP70-208ENST00000599687 SPRR2FQ96RM1 72 aa3.53□□□□□ -1.84
SNRNP70-208ENST00000599687 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
SNRNP70-208ENST00000599687 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
SNRNP70-208ENST00000599687 SERP2Q8N6R1 65 aa3.51□□□□□ -1.85
SNRNP70-208ENST00000599687 KMT2DO14686 5537 aa3.49□□□□□ -1.85
SNRNP70-208ENST00000599687 CCDC179H3BU77 68 aa3.49□□□□□ -1.85
SNRNP70-208ENST00000599687 KRTAP5-8O75690 187 aa3.49□□□□□ -1.85
SNRNP70-208ENST00000599687 COX7CP15954 63 aa3.48□□□□□ -1.85
SNRNP70-208ENST00000599687 SPRR2EP22531 72 aa3.48□□□□□ -1.85
SNRNP70-208ENST00000599687 SPRR2BP35325 72 aa3.48□□□□□ -1.85
SNRNP70-208ENST00000599687 SPRR2AP35326 72 aa3.48□□□□□ -1.85
SNRNP70-208ENST00000599687 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
SNRNP70-208ENST00000599687 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
SNRNP70-208ENST00000599687 KRTAP5-5Q701N2 237 aaPredicted RBP3.45□□□□□ -1.86
SNRNP70-208ENST00000599687 LCE3DQ9BYE3 92 aa3.45□□□□□ -1.86
SNRNP70-208ENST00000599687 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
SNRNP70-208ENST00000599687 BRK1Q8WUW1 75 aa3.42□□□□□ -1.86
SNRNP70-208ENST00000599687 ROMO1P60602 79 aa3.41□□□□□ -1.86
SNRNP70-208ENST00000599687 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
SNRNP70-208ENST00000599687 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SNRNP70-208ENST00000599687 COA5Q86WW8 74 aa3.41□□□□□ -1.86
SNRNP70-208ENST00000599687 MDN1Q9NU22 5596 aa3.39□□□□□ -1.87
SNRNP70-208ENST00000599687 Q1T7F1 81 aa3.39□□□□□ -1.87
SNRNP70-208ENST00000599687 ATP5EP56381 51 aaPredicted RBP3.37□□□□□ -1.87
SNRNP70-208ENST00000599687 SPRR2DP22532 72 aa3.36□□□□□ -1.87
SNRNP70-208ENST00000599687 H7BZZ5 65 aa3.35□□□□□ -1.87
SNRNP70-208ENST00000599687 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
SNRNP70-208ENST00000599687 CYSTM1Q9H1C7 97 aa3.35□□□□□ -1.87
SNRNP70-208ENST00000599687 SERP1Q9Y6X1 66 aa3.35□□□□□ -1.87
SNRNP70-208ENST00000599687 SPATA8Q6RVD6 105 aa3.32□□□□□ -1.88
SNRNP70-208ENST00000599687 A0A0D9SG42 100 aa3.31□□□□□ -1.88
SNRNP70-208ENST00000599687 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
SNRNP70-208ENST00000599687 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
SNRNP70-208ENST00000599687 A0A1B0GU69 56 aa3.24□□□□□ -1.89
SNRNP70-208ENST00000599687 MT1EP04732 61 aa3.22□□□□□ -1.89
SNRNP70-208ENST00000599687 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
SNRNP70-208ENST00000599687 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
SNRNP70-208ENST00000599687 MT1GP13640 62 aa3.13□□□□□ -1.91
SNRNP70-208ENST00000599687 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
SNRNP70-208ENST00000599687 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
SNRNP70-208ENST00000599687 PRR15LQ9BU68 103 aa3.12□□□□□ -1.91
SNRNP70-208ENST00000599687 LINC01558Q9Y6Z2 57 aa3.12□□□□□ -1.91
SNRNP70-208ENST00000599687 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
SNRNP70-208ENST00000599687 TNP1P09430 55 aa3.1□□□□□ -1.91
SNRNP70-208ENST00000599687 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
SNRNP70-208ENST00000599687 MT1LQ93083 61 aa3.08□□□□□ -1.92
SNRNP70-208ENST00000599687 MT1MQ8N339 61 aa3.07□□□□□ -1.92
SNRNP70-208ENST00000599687 CDC42SE1Q9NRR8 79 aa3.07□□□□□ -1.92
SNRNP70-208ENST00000599687 UQCR11O14957 56 aa3.03□□□□□ -1.92
SNRNP70-208ENST00000599687 KRTAP12-3P60328 96 aa2.97□□□□□ -1.93
SNRNP70-208ENST00000599687 MT4P47944 62 aa2.94□□□□□ -1.94
SNRNP70-208ENST00000599687 INE1O15225 51 aa2.93□□□□□ -1.94
SNRNP70-208ENST00000599687 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
SNRNP70-208ENST00000599687 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
SNRNP70-208ENST00000599687 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
SNRNP70-208ENST00000599687 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
SNRNP70-208ENST00000599687 KRTAP20-2Q3LI61 65 aa2.76□□□□□ -1.97
SNRNP70-208ENST00000599687 KRTAP12-4P60329 112 aa2.73□□□□□ -1.97
SNRNP70-208ENST00000599687 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
SNRNP70-208ENST00000599687 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SNRNP70-208ENST00000599687 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
SNRNP70-208ENST00000599687 MT1AP04731 61 aa2.62□□□□□ -1.99
SNRNP70-208ENST00000599687 KRTAP6-1Q3LI64 71 aa2.61□□□□□ -1.99
SNRNP70-208ENST00000599687 KRTAP6-2Q3LI66 62 aa2.49□□□□□ -2.01
SNRNP70-208ENST00000599687 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
SNRNP70-208ENST00000599687 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SNRNP70-208ENST00000599687 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
SNRNP70-208ENST00000599687 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
SNRNP70-208ENST00000599687 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
SNRNP70-208ENST00000599687 PRM1P04553 51 aa1.39□□□□□ -2.19
SNRNP70-208ENST00000599687 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SNRNP70-208ENST00000599687 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 201.3 ms