RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
C19orf54-208ENST00000598352 PSPHP1O15172 72 aa4.36□□□□□ -1.71
C19orf54-208ENST00000598352 V9GYY9 64 aa4.35□□□□□ -1.71
C19orf54-208ENST00000598352 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
C19orf54-208ENST00000598352 KRTAP12-3P60328 96 aa4.31□□□□□ -1.72
C19orf54-208ENST00000598352 KRTAP25-1Q3LHN0 102 aa4.29□□□□□ -1.72
C19orf54-208ENST00000598352 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
C19orf54-208ENST00000598352 K7ERS5 55 aa4.25□□□□□ -1.73
C19orf54-208ENST00000598352 KRTAP4-7Q9BYR0 210 aa4.24□□□□□ -1.73
C19orf54-208ENST00000598352 RPS28P62857 69 aaKnown RBP4.21□□□□□ -1.74
C19orf54-208ENST00000598352 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
C19orf54-208ENST00000598352 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
C19orf54-208ENST00000598352 A6NED7 52 aa4.19□□□□□ -1.74
C19orf54-208ENST00000598352 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
C19orf54-208ENST00000598352 PCP4P48539 62 aa4.17□□□□□ -1.74
C19orf54-208ENST00000598352 HMCN1Q96RW7 5635 aa4.16□□□□□ -1.74
C19orf54-208ENST00000598352 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
C19orf54-208ENST00000598352 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
C19orf54-208ENST00000598352 MT4P47944 62 aa4.13□□□□□ -1.75
C19orf54-208ENST00000598352 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
C19orf54-208ENST00000598352 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
C19orf54-208ENST00000598352 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
C19orf54-208ENST00000598352 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
C19orf54-208ENST00000598352 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
C19orf54-208ENST00000598352 ROMO1P60602 79 aa4.03□□□□□ -1.76
C19orf54-208ENST00000598352 AHNAK2Q8IVF2 5795 aa4.02□□□□□ -1.77
C19orf54-208ENST00000598352 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
C19orf54-208ENST00000598352 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
C19orf54-208ENST00000598352 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
C19orf54-208ENST00000598352 SPRR5A0A1B0GTR4 108 aa3.91□□□□□ -1.78
C19orf54-208ENST00000598352 KRTAP5-10Q6L8G5 202 aa3.89□□□□□ -1.79
C19orf54-208ENST00000598352 KRTAP12-4P60329 112 aa3.87□□□□□ -1.79
C19orf54-208ENST00000598352 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
C19orf54-208ENST00000598352 KRTAP5-3Q6L8H2 238 aa3.83□□□□□ -1.8
C19orf54-208ENST00000598352 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
C19orf54-208ENST00000598352 MT1AP04731 61 aa3.77□□□□□ -1.81
C19orf54-208ENST00000598352 KRTAP6-1Q3LI64 71 aa3.76□□□□□ -1.81
C19orf54-208ENST00000598352 KRTAP5-7Q6L8G8 165 aa3.72□□□□□ -1.81
C19orf54-208ENST00000598352 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
C19orf54-208ENST00000598352 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
C19orf54-208ENST00000598352 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
C19orf54-208ENST00000598352 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
C19orf54-208ENST00000598352 KRTAP4-11Q9BYQ6 195 aa3.57□□□□□ -1.84
C19orf54-208ENST00000598352 KRTAP5-8O75690 187 aa3.45□□□□□ -1.86
C19orf54-208ENST00000598352 MT3P25713 68 aa3.43□□□□□ -1.86
C19orf54-208ENST00000598352 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
C19orf54-208ENST00000598352 OBSCNQ5VST9 7968 aa3.35□□□□□ -1.87
C19orf54-208ENST00000598352 PRAC1Q96KF2 57 aa3.34□□□□□ -1.87
C19orf54-208ENST00000598352 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
C19orf54-208ENST00000598352 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
C19orf54-208ENST00000598352 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
C19orf54-208ENST00000598352 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
C19orf54-208ENST00000598352 KRTAP9-9Q9BYP9 154 aa3.22□□□□□ -1.89
C19orf54-208ENST00000598352 PRO0628Q9UI54 55 aa3.21□□□□□ -1.9
C19orf54-208ENST00000598352 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
C19orf54-208ENST00000598352 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
C19orf54-208ENST00000598352 KRTAP4-2Q9BYR5 136 aa3□□□□□ -1.93
C19orf54-208ENST00000598352 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
C19orf54-208ENST00000598352 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
C19orf54-208ENST00000598352 SVIPQ8NHG7 77 aa2.88□□□□□ -1.95
C19orf54-208ENST00000598352 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
C19orf54-208ENST00000598352 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
C19orf54-208ENST00000598352 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
C19orf54-208ENST00000598352 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
C19orf54-208ENST00000598352 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
C19orf54-208ENST00000598352 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
C19orf54-208ENST00000598352 LCE1FQ5T754 118 aa2.54□□□□□ -2
C19orf54-208ENST00000598352 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
C19orf54-208ENST00000598352 H3BS24 57 aa2.34□□□□□ -2.03
C19orf54-208ENST00000598352 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
C19orf54-208ENST00000598352 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
C19orf54-208ENST00000598352 NDUFAF8A1L188 74 aa2.24□□□□□ -2.05
C19orf54-208ENST00000598352 PRM1P04553 51 aa2.07□□□□□ -2.08
C19orf54-208ENST00000598352 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
C19orf54-208ENST00000598352 A0A0A0MQY5 61 aa1.8□□□□□ -2.12
C19orf54-208ENST00000598352 INE1O15225 51 aa1.79□□□□□ -2.12
C19orf54-208ENST00000598352 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
C19orf54-208ENST00000598352 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 219.8 ms